Table 1.
Selection process | Initial dataset | Genomic span > 200 kb | Halftag/s within repeats | Mapping to multiple loci | Unmappable to the genome | No longer novel | Final PETs |
Novel | 143 | 48 | 48 | 26 | 10 | 1 | 10 |
Intergenic Splicing | 10 | - | - | - | 3 | 1 | 6 |
Total | 153 | 48 | 48 | 26 | 13 | 2 | 16 |
The numbers refer to PET counts in each named category corresponding to annotation-based filtering described in the text. The 'Mapping to multiple loci' and 'Unmappable to the genome' columns are the combined results of both In-Silico PCR and BLASTN.