Table 3.
Pearson correlation coefficients comparing expression vectors of jasmonate related genes
| P450 name | Data set | Correlation coefficient (r-value) of P450 with jasmonate related gene | |||||||||||||
| LOX2 | LOX3 | LOXL1 | LOXL2 | AOS | HPL1 | AOC1 | AOC2 | AOC4 | OPR2 | OPR3 | OPRL1/2 | TAT3 | JR2 | ||
| CYP74A | organs | 0.64 | - | - | - | 1.00 | - | 0.88 | - | - | 0.56 | 0.69 | - | 0.60 | 0.70 |
| AOS | stress | 0.67 | 0.58 | - | - | 1.00 | 0.60 | 0.81 | - | - | - | 0.71 | - | - | - |
| hormones | 0.57 | 0.81 | - | 0.79 | 1.00 | 0.59 | 0.80 | 0.80 | - | - | 0.86 | - | 0.71 | 0.55 | |
| mutants | - | 0.61 | 0.50 | - | 1.00 | - | 0.62 | - | - | - | - | - | - | 0.51 | |
| CYP81D1 | organs | - | - | - | - | - | - | - | - | - | - | - | 0.55 | 0.66 | - |
| stress | 0.52 | - | - | - | 0.57 | 0.51 | 0.50 | - | - | - | 0.60 | - | 0.61 | 0.53 | |
| hormones | - | 0.51 | - | - | 0.52 | - | 0.63 | - | - | - | 0.61 | - | 0.54 | - | |
| CYP94C1 | stress | - | 0.58 | - | - | - | - | - | 0.67 | - | - | 0.61 | - | - | - |
| hormones | - | 0.79 | - | 0.79 | 0.69 | - | 0.58 | 0.63 | - | - | 0.79 | - | 0.55 | - | |
| mutants | - | 0.69 | - | 0.71 | - | - | - | 0.62 | - | - | 0.61 | - | - | - | |
| CYP94B1 | hormones | - | 0.64 | - | 0.61 | 0.61 | 0.53 | 0.51 | - | - | - | 0.64 | - | - | - |
| mutants | - | 0.62 | - | 0.51 | 0.63 | - | 0.51 | - | - | - | 0.60 | - | - | - | |
| CYP96A4 | organs | 0.60 | 0.56 | - | 0.50 | 0.64 | 0.52 | 0.61 | - | - | - | 0.61 | - | 0.65 | 0.57 |
| hormones | - | 0.64 | - | 0.60 | 0.74 | 0.71 | 0.60 | - | - | - | 0.72 | - | - | - | |
| CYP74B2 | organs | 0.73 | - | - | - | - | 1.00 | - | - | 0.52 | - | - | - | - | 0.62 |
| HPL1 | stress | 0.67 | - | - | - | 0.60 | 1.00 | 0.53 | - | - | - | 0.57 | - | - | 0.54 |
| CYP97B3 | organs | 0.71 | - | - | - | 0.58 | 0.59 | 0.63 | - | - | - | - | 0.66 | - | 0.65 |
| CYP90A1 | organs | 0.63 | - | - | - | 0.56 | - | 0.57 | - | 0.66 | - | - | 0.51 | - | 0.56 |
| CYP72A11 | organs | 0.74 | - | - | - | 0.69 | - | 0.78 | - | 0.53 | - | 0.56 | 0.65 | 0.52 | 0.67 |
| CYP83B1 | organs | - | - | - | - | 0.76 | - | 0.69 | - | - | 0.57 | 0.63 | - | 0.58 | 0.55 |
| CYP71B7 | organs | - | - | - | - | 0.80 | - | 0.82 | - | - | 0.61 | 0.52 | - | 0.52 | 0.56 |
| CYP72A8 | organs | 0.59 | - | - | - | 0.56 | - | 0.62 | - | - | 0.60 | - | 0.68 | 0.59 | - |
Shown are genes in the pathways, which have at least one co-expressed P450; only P450s are shown, which have at least six co-expressed jasmonate genes (r > 0.5) in at least one data set. Abbreviations of genes (AGI locus and Affymetrix probe set are given in brackets): LOX2: lipoxygenase 2 (At3g45140, 252618_at); LOX3: lipoxygenase 3 (At1g17420; 261037_at); LOXL1: lipoxygenase like 1 (At1g67560; 260190_at); LOXL2: (At1g72520; 260399_at); AOS, CYP74A: allene oxide synthase (At5g42650; 249208_at); HPL1, CYP74B2: hydroperoxide lyase 1 (At4g15440; 245253_at); AOC1: allene oxide cyclase 1 (At3g25760; 257641_s_at); AOC2: allene oxide cyclase 2 (At3g25780; 257644_at); AOC4: allene oxide cyclase 4 (At1g13280; 259366_at); OPR2: 12-oxophytodienoic acid reductase 2 (At1g76690; 259875_s_at); OPR3: 2-oxophytodienoate reductase 3 (At2g06050; 265530_at); OPRL1/2: 12-oxophytodienoate reductase like 1 and 2 (At1g17990/At1g18020; 255895_at); TAT3: tyrosine aminotransferase 3 (At2g24850; 263539_at); JR2: cystine lyase, jasmonic acid response 2.