Table 3.
Distribution of differentially expressed genes among the single mutants and the double mutants according to MIPS functional categories. Some of the genes are assigned to more than one functional category by MIPS.
| Functional Category | Up-regulated | Down-regulated | ||||
| ypr013CΔ | ypro015CΔ | ypr013CΔ/ypro015CΔ | ypr013CΔ | ypro015CΔ | ypr013CΔ/ypro015CΔ | |
| Metabolism | 38.1% | 19.2% | 20.4 | 24% | 21.0% | 34.8 |
| Transcription | 29.0% | 35.9% | 42.1 | 6.0% | 9.2% | 10.1 |
| Protein with Binding | 18.1% | 26.3% | 31.4 | 6.0% | 9.2% | 15.8 |
| Protein Synthesis | 3.63% | 10.5% | 14.1 | 2% | 7.56% | 12 |
| Cell Cycle & DNA process | 7.27% | 15.7% | 12.2 | 12% | 9.24% | 13.9 |
| Cellular Transport | 16.3% | 12.2% | 11 | 10% | 8.4% | 16.4 |
| Energy | 14.5% | 6.14% | 2.0% | 7.56% | ||
| Protein fate | 12.7% | 8.77% | 11.8 | 6.0% | 5.04% | 10.7 |
| Unclassified | 9.09% | 13.1% | 11.8 | 40% | 36.1% | 14.5 |
| Environment Interactions | 20% | 7.01% | 11 | 20% | 8.4% | 10.7 |
| Cell Rescue, Defense, Virulence | 9.09% | 7.89% | 9.05 | 20% | 14.2% | 9.49 |