Table 5.
MiRNAs that match with two predicted 7-bp motifs (one G-U pair allowed)
miRNA | 7-bp motif | MBS index | Match position | Mature miRNA sequence* |
miR-195 | GTGTTGC | 6 | 3-9 | taGCAGCACagaaatattggc |
CTGTGCT | 16 | 5-11 | tagcAGCACAGaaatattggc | |
miR-196b | ACAACAG | 10 | 12-18 | taggtagtttcCTGTTGTtgg |
AGGGAAC | 21 | 7-13 | taggtaGTTTCCTgttgttgg | |
miR-330† | CTGTGCT | 16 | 5-11 | gcaaAGCACAGggcctgcagaga |
GGTCCTG | 18 | 9-15 | gcaaagcaCAGGGCCtgcagaga | |
miR-666† | GCTGTGC | 2 | 6-12 | agcggGCACAGCtgtgagagcc |
CTGTGCT | 16 | 5-11 | agcgGGCACAGctgtgagagcc | |
miR-710† | CAGGACT | 19 | 4-10 | ccaAGTCTTGgggagagttgag |
CTCTTCC | 29 | 11-17 | ccaagtcttgGGGAGAGttgag |