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. 2008 May 28;3(5):e2295. doi: 10.1371/journal.pone.0002295

Table 1. Summary of sites tests for positive selection.

Description CPGa N LRT statistics Parameter estimates
M1 vs. M2 M7 vs. M8 M8 vs. M8a % of sites with dN/dS>1 dN/dS
M2 M8
65 kDa ISG 19416372 3 13.77** 14.58*** 13.77*** 8 8 4.34
65 kDa ISG 21719250 5 45.50*** 45.56*** 45.49*** 12 12 12.68
75 kDa ISG 20195704 3 40.73*** 41.14*** 40.73*** 18 18 3.96
Adenosine transporter 20117965 6 24.49*** 29.03*** 22.74*** 1 1 9.56
Amino acid transporter 22063411 3 23.20*** 23.24*** 23.20*** 11 11 8.14
Amino acid transporter 19796418 3 30.47*** 30.52*** 30.51*** 3 3 27.7
Procyclin 19416463 5 6.11* 8.18* 6.10* 1 1 8.24
GRESAG2 20975481 3 18.36*** 18.51*** 18.36*** 5 5 17.69
Hypothetical 20115952 3 10.89** 10.87** 10.24** 11 15 10.07
Hypothetical 19340333 4 13.43** 13.43** 13.43*** 6 6 10.72
Hypothetical 20206217 4 13.49** 13.51** 13.49*** 4 4 23.94
Hypothetical 21586974 9 16.62*** 16.63*** 16.08*** 14 14 5.86
Hypothetical 21769349 3 16.18*** 16.49*** 16.18*** 9 9 10.6
Receptor-type AC 19651441 5 46.95*** 47.02*** 46.95*** 9 9 7.21
Receptor-type AC 20115358 8 131.60*** 131.41*** 131.09*** 7 7 4.6
Receptor-type AC 21943524 8 183.29*** 182.30*** 179.44*** 6 5 6.06
Receptor-type AC 21139502 5 279.88*** 279.75*** 279.74*** 10 10 12.95
RHS 20343633 6 17.58*** 17.89*** 17.56*** 22 25 2.33
RHS 20439293 3 32.94*** 33.07*** 32.94*** 9 9 12.26
RHS 20461581 5 38.14*** 38.36*** 38.09*** 3 3 35.12
RHS 19651414 8 102.43*** 102.55*** 102.43*** 18 18 6.87
RHS 21995461 3 106.01*** 106.08*** 105.98*** 4 4 33.46
RHS 20529562 4 157.08*** 157.19*** 156.87*** 7 7 10.12

N, number of species analysed; M1 vs. M2, likelihood ratio test statistic for model M1 versus M2; M7 vs. M8, likelihood ratio test statistic for model M7 versus M8; Parameter estimates: percentage of sites in dN/dS>1 category and estimated dN/dS parameter under model M8. ISG, invariant surface glycoprotein. RHS retrotransposon hot spot protein. * Significance with P<0.05; ** Significance with P<0.01; *** Significance with P<0.001. A CPG jaccard cluster number from El Sayed et al [8].