Table 2.
Effect of RHD mutations on protein activity in zebrafish
RNA Injecteda | RNA Concentration (pg) | Phenotypeb,c
|
n | |||
---|---|---|---|---|---|---|
Wild-type (%) | Class I-III (%) | Class IV-V (%) | ||||
Uninjected | NA | 100 | — | — | — | 176 |
zsix2.1 | 50 | 44 | 45 | 11 | — | 162 |
100 | 6 | 57 | 37 | — | 125 | |
zsix2.1 L43F | 50 | 84 | 12 | 4 | — | 138 |
100 | 70 | 23 | 8 | — | 105 | |
Zsix2.1 Q241L | 50 | 89 | 8 | 3 | — | 110 |
100 | 91 | 7 | 2 | — | 111 | |
Zsix2.1 D273N | 50 | 96 | 4 | — | — | 124 |
100 | 98 | 2 | 1 | 124 |
Wild-type (Class I) | Class II | Class III | Class IV | |||
---|---|---|---|---|---|---|
Uninjected | NA | 100 | — | — | — | 132 |
zbmp4 | 25 | 30 | 48 | 17 | 5 | 100 |
50 | 32 | 16 | 36 | 16 | 44 | |
100 | — | 8 | 74 | 18 | 50 | |
zbmp4 S84C | 25 | 69 | 29 | — | 2 | 126 |
50 | 24 | 30 | 19 | 27 | 37 | |
100 | — | — | 67 | 33 | 9 | |
zbmp4 T109S | 25 | 69 | 21 | 8 | 2 | 109 |
50 | 38 | 13 | 25 | 25 | 16 | |
100 | — | — | 29 | 71 | 7 | |
zbmp4 D144K | 25 | 96 | 4 | — | — | 112 |
50 | 54 | 19 | 12 | 15 | 26 | |
100 | 26 | 44 | 30 | — | 27 |
Differences between six2.1 and mutated six2.1 injection results are statistically significant at both 50 pg and 100 pg using the χ 2 test of independence. Differences between bmp4 and mutated bmp4 injection results are statistically significant at 25 pg only using the χ 2 test of independence (see Supplemental Table 1).
Dorsalized phenotypes resulting from six2.1 RNA injection were scored according to reference 52 as follows: class I-III, embryos at 24 hpf that lacked tail structures (class I and II) or had shortened twisted tails missing ventral structures (class III); class IV-V, embryos with a reduction of ventral cell types and expansion of notochord and anterior somites at 24 hpf (class IV) and bursting of embryos prior to 24 hpf due to somite expansion and constriction (class V).
Ventralized phenotypes resulting from bmp4 RNA injection were scored according to reference 53 as follows: class I, wild-type; class II, reduced head, expanded hematopoietic mesoderm; class III, loss of head and notochord; class IV, spindle-shaped embryo with no obvious dorsal/ventral polarity.
NA, not applicable.