Table 2. Prediction results for combined cohorts.
DQ2.2 | ||||||
+ | − | total | sensitivity | 0.992 | ||
SNP prediction | + | 126 | 3 | 129 | specificity | 0.998 |
− | 1 | 1318 | 1319 | positive predictive value | 0.977 | |
total | 127 | 1321 | 1448 | r-squared | 0.966 | |
DQ2.5 | ||||||
+ | − | total | sensitivity | 1.000 | ||
SNP prediction | + | 569 | 1 | 570 | specificity | 0.999 |
− | 0 | 888 | 888 | positive predictive value | 0.998 | |
total | 569 | 889 | 1458 | r-squared | 0.997 | |
DQ7 | ||||||
+ | − | total | sensitivity | 1.000 | ||
SNP prediction | + | 94 | 4 | 98 | specificity | 0.997 |
− | 0 | 1372 | 1372 | positive predictive value | 0.959 | |
total | 94 | 1376 | 1470 | r-squared | 0.956 | |
0.069 | ||||||
DQ8 | ||||||
+ | − | total | sensitivity | 0.991 | ||
SNP prediction | + | 110 | 6 | 116 | specificity | 0.996 |
− | 1 | 1367 | 1368 | positive predictive value | 0.948 | |
total | 111 | 1373 | 1484 | r-squared | 0.935 |