Translation, ribosomal structure and biogenesis |
|
ACATCCATCA |
28 |
73 |
0 |
Ss 40S ribosomal protein S20, RPS20 [AY550070] |
AAACCAAAGA |
1 |
10 |
0.004 |
Ss cDNA [AJ681350]homolog to Hs small nuclear ribo- nucleoprotein polypeptides B and B1, SNRPB [BC080516] |
TGACTATAAC |
18 |
35 |
0.007 |
Ss cDNA [BX923125] homolog to Hs ribosomal protein L24, RPL24 [BC000690] |
AAGTTCCCGC |
17 |
32 |
0.012 |
Ss cDNA [BX674755] homolog to Hs ribosomal protein L18a, RPL18A [BC066319] |
AACCTAATTA |
58 |
77 |
0.025 |
Ss 40S ribosomal protein S12, RPS12 [NM_214363] |
AACTCAATAA |
44 |
62 |
0.027 |
Ss ribosomal protein L10a, RPL10A [NM_001097477] |
AAAGATTAAG |
20 |
32 |
0.040 |
Ss ribosomal protein L27, RPL27 [NM_001097479] |
Signal transduction mechanisms |
|
ATTGTAGATG |
13 |
31 |
0.002 |
Ss guanine nucleotide beta like protein GNB2L1, RACK1 [NM_214332] |
AGTTATGAAG |
0 |
5 |
0.028 |
Ss cDNA [CN160727] homolog to Hs ras-related GTP-binding protein, Rheb [D78132] |
AAGCTACACA |
4 |
11 |
0.043 |
Ss cDNA [CJ016486] homolog to Hs calmodulin 1 [phosphorylase kinase, delta], CALM1 [BC011834] |
Transcription |
|
CAGAGGGACA |
1 |
10 |
0.004 |
Ss cDNA [CN 157150] homolog to Hs retinoblastoma binding protein, RbAp48 [X74262] |
ACAACTGGGG |
0 |
6 |
0.014 |
Ss cDNA [CJ020293] homolog to Hs general transcription factor IIB, GTF2B [NM_001514] |
TGATAGAAGA |
6 |
15 |
0.025 |
Ss cDNA [CF792678] homolog to Hs activating transcription factor 4, ATF4 [BC073754] |
TATGAATAAG |
4 |
11 |
0.043 |
Ss non-metastatic cells 1 protein NM23A [NM_001044610] |
Secondary metabolites biosynthesis, transport and catabolism |
|
AGTATCAACA |
24 |
46 |
0.002 |
Ss TYRP1 tyrosinase related protein1 [AB207240] |
Secretion |
|
TGCTCAGGCT |
0 |
13 |
0.000 |
Ss cDNA [BX674961] homolog to secernin |
Energy production and conversion |
|
AATACAAGTT |
3 |
12 |
0.014 |
Ss NADH dehydrogenase [ubiquinone]1 alpha subcomplex 4 NDUFA4 [NM_001097468] |
Posttranslational modification, protein turnover |
|
GAGGTGGAGA |
3 |
10 |
0.043 |
Ss cDNA [CJ014518] homolog to Hs peptidylprolyl isomerase B [cyclophilin B], PPIB [NM_000942] |
General prediction only |
|
ATTTCTAGGC |
0 |
5 |
0.028 |
Ss cDNA [CK455473] homolog to Hs CDC10 cell division cycle 10 homolog [S. cerevisiae], CDC10 [NM_001788] |
Function unknown |
|
TCACCCGCAA |
0 |
9 |
0.0015 |
No reliable matches |
TCGTCCCTGT |
0 |
8 |
0.0031 |
Ss cDNA [BX665592] |
CCTGTGCTGA |
0 |
7 |
0.0064 |
Ss cDNA [AJ647874] |
GGTCATTCAT |
0 |
7 |
0.0064 |
No reliable matches |
TCGCCTGGAC |
0 |
7 |
0.0064 |
No reliable matches |
TCGTCCCTTC |
0 |
7 |
0.0064 |
No reliable matches |
ATTCATGTCA |
3 |
13 |
0.0079 |
Ss cDNA [BP164587] |
GTCTAATCAC |
2 |
10 |
0.0134 |
No reliable matches |
AATGACCGAC |
0 |
6 |
0.0147 |
No reliable matches |
CACCCGCAAT |
0 |
6 |
0.0149 |
No reliable matches |
CCTTCCGACT |
0 |
6 |
0.0149 |
No reliable matches |
CGTCCCTGTG |
0 |
6 |
0.0149 |
No reliable matches |
AGATAATTTG |
0 |
5 |
0.0285 |
Ss cDNA clone [EW659942] |
ATAGACGAGC |
0 |
5 |
0.0285 |
No reliable matches |
CTGCATTGCT |
1 |
7 |
0.0321 |
Ss cDNA [BX922537] |
AGAATATAAG |
5 |
13 |
0.0341 |
No reliable matches |
CCGCGTTGCT |
41 |
57 |
0.0362 |
Ss cDNA [AJ666089] |
ATGAAGATAT |
2 |
8 |
0.0434 |
Ss cDNA [CB286104] |
TGCTGCAGGG |
4 |
11 |
0.0435 |
Ss cDNA [CA780804] |