TABLE 2.
The glutathione peroxidase family in Chlamydomonas reinhardtii
Name | Se-Cys | Scaffold | Putative subcellular localization | No. of ESTs | Protein length (aa) |
---|---|---|---|---|---|
GPX1 | Yes | 7:731611–733930 | Mitochondrion and/or chloroplast | 25 | 200 |
GPX2 | Yes | 95:205010–208056 | Mitochondrion and/or chloroplast | 3 | 258 |
GPX3 | No | 19:607308–609738 | Mitochondrion | 15 | 200 |
GPX4 | No | 10:678260–680851 or 10:676669–680804 | Cytosol or membrane anchored | 6 or 8 | 206 or 536 |
GPX5 | No | 4:1975794–1977833 | Cytosol (short form), chloroplast (long form) | 59 | 162/211 |
Scaffold indicates the location of the corresponding gene in Chlamydomonas reinhardtii genome version 3.0 (http://genome.jgi-psf.org/Chlre3). Subcellular localizations are deduced from the analysis of the protein N-terminal sequence by several prediction programs (Predotar, TargetP, SignalP, and PSORT available at http://www.expasy.ch). The number of ESTs was determined by BLAST alignment of the transcript sequence with NCBI DBest database of November 12, 2007, and supplemented with JGI EST sequences.