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. 2008 May;179(1):555–567. doi: 10.1534/genetics.107.083006

TABLE 5.

Bottleneck decision table

	No recombination		Recombination (r⁸)
T_start	Strong (b = 0.01)	Weak (b = 0.1)	Strong (b = 0.01)	Weak (b = 0.1)
Small S (≈10), small n (≈20)
0.02	D, F, D, F, R₂, F_s	D*^a, F_s^a	D^a, F^a, D^a, F^a, R₂^a	D^a, F^a, D^a, F^a, R₂^a
0.04	D, R₂, F_s	F_s^a, Z_nS^a, Z_A^a	D^a, R₂^a	D^a, F^a, D^a, F^a, R₂^a
0.08–0.12	R₂, F_s	D, D, F, R₂, F_s, Z_nS	R₂	D, R₂
Small S (≈10), large n (≈100)
0.02	D, F, F*, R₂, F_s, Dh	D^a, D^F^a, F_s^a	D*, Dh	D^a, D^F^a, R₂^a
0.04	D, R₂, F_s	F_s^a, B^a, Z_nS^a, Z_A^a	D, D*, R₂	D^a, D^F^a ^b, R₂^a
0.08	D, R₂, F_s	D, F, R₂, F_s, Dh	D, R₂	D^F
0.12	F_s	D, R₂, F_s	D, R₂	D^F
Large S (≈100 or more), small n (≈20)
0.02	D, D^F, F, D, F, R₂, F_s	D*^a, F_s^a	D^a, D^F^a, F^a, D^a, F^a, R₂^a	D^F^a, F^a, D^a, F^a
0.04	D, D^F, F, D, F, R₂, F_s, Z_nS, Z_A	F_s^a ^b, B^a, Q^a, Z_nS^a, Z_A^a	D^a, D^F^a, F^a, D^a, F^a, R₂^a	D^a, D^F^a, F^a, F*^a, R₂^a
0.08	D, R₂, Z_nS, Z_A	R₂, F_s	D, D^F, F, D, F, R₂	D, R₂
0.12	R₂, Z_nS	R₂	D, R₂	D, R₂
Large S (≈100 or more), large n (≈100)
0.02	D, F, D, F, R₂	D*^a, F_s^a	D^F^a, D*^a	D^a, D^F^a ^b, F^a ^b, D^a ^b, F^a ^b, R₂^a
0.04	D, D^F, F, D, F, R₂, F_s, Z_nS, Z_A	F_s^a, B^a, Q^a, Z_nS^a, Z_A^a	D^a, D^F^a, F^a, D^a, F^a, R₂^a	D^a, D^F^a ^b, F^a ^b, D^a ^b, F^a ^b, R₂^a
0.08	D, D^F, F, D, F, R₂, Z_nS, Z_A	F_s	D, D^F, F, D, F, R₂	D^F, F, D, F, R₂
0.12	D, R₂, Z_nS	F_s	D, F, F*, R₂	D, F, F*, R₂

Power is at the left tail of the distribution unless otherwise indicated. D^F, Fu and Li's D.

^a

Power is at the right tail of the distribution.

^b

Only for finished bottlenecks.