Table 2.
Summary of sequence changes found in ROBO2a
Exon | DNA Change and Positionb | Type of Mutation | AA Change | Frequency in Control Subjects | References |
---|---|---|---|---|---|
2 | 94C→A | Silent | Arg32Arg | 0.24d | rs6788280 |
7 | 982G→A | Missense | Gly328Serc | 0 | |
11 | 1544A→T | Missense | Asn515Ilec | 0 | |
12 | 1793T→C | Polymorphism | Ile598Thr | 0.01e | Lu et al.12 |
15 | 2235A→C | Silent | Val745Val | NT | |
15 | 2297A→G | Missense | Asp766Glyc | 0 | |
16 | 2390G→A | Missense | Arg797Glnc | 0 | |
25 | 4056C→T | Silent | Gly1352Gly | NT | |
IVS1 | IVS1 + 115 C→T | Polymorphism? | – | NT | |
IVS1 | IVS1–53 G→A | Polymorphism | – | 0.23e | rs9874095 |
IVS3 | IVS3–3 C→T | Polymorphism? | – | NT | |
IVS4 | IVS4 + 109 C→T | Polymorphism? | – | NT | |
IVS6 | IVS6–24 G→A | Polymorphism? | – | NT | |
IVS9 | IVS9 + 33 A→G | Polymorphism | – | 0.04e | rs17525412 |
IVS14 | IVS14 + 23 T→C | Polymorphism? | – | NT | |
IVS20 | IVS20–14 G→A | Polymorphism? | – | NT | |
IVS20 | IVS20 + 53 A→G | Polymorphism? | – | NT | |
IVS22 | IVS22 + 13 del A | Polymorphism? | – | NT | |
IVS22 | IVS22 + 120 G→A | Polymorphism | – | 0.35e | rs1523768 |
IVS23 | IVS23 + 7 G→A | Polymorphism? | – | NT | |
IVS24 | IVS24 + 28 C→T | Polymorphism | – | 0.14e | rs3821735 |
IVS24 | IVS24 + 42 C→T | Polymorphism? | – | NT | |
IVS25 | IVS25 + 149 A→G | Polymorphism | – | 0.39e | rs1721189 |
3′UTR | 3′UTR*121 G→A | Polymorphism? | – | NT |
NT, not tested; UTR, untranslated region.
Numbering (position 1) starts at base A from the ATG (Ref. Seq. NM_002942.2 and NP_002933.1 for the protein, NCBI build 36.2).
Novel likely pathogenic mutations.
Reported only in Sub-Saharan African population.
Frequency of the alternative allele in Caucasian population reported in NCBI, build 36.2.