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. 2008 Apr 8;98(10):1696–1703. doi: 10.1038/sj.bjc.6604326

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Copyright © 2008 Cancer Research UK

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Alignment of Ensembl gastrin genomic sequence (Genomic), Ensembl gastrin transcript (Ensembl), GenBank sequence X00183 (X00183) and three representative RLM-RACE clones (1, 2 and 7). Clones 1 and 7 occurred once each, and clone 2 occurred six times. The beginning of exon 1, intron 1 and exon 2 are indicated by ^* and the ATG start codon is highlighted in bold. The central 2860 bp of intron 1 have been omitted for clarity and their position is indicated by - - - - - - - -; only sequence of the first 13-bp and final 171-bp of intron 1 are shown. The RLM-RACE clones have high homology with the region defined by Ensembl as intron 1 and with X00183; ^ indicates positions where one of the clones or X00183 did not match the genomic sequence. There were only 10 nucleotides, which matched the Ensembl transcript, indicated by ∼ below the sequence. The UTRScan-predicted IRES within X00183 is highlighted by shading.