Table 2.

Significance of YMF results for tissue/stage-specific subsets

Tissue/stage*	Number of CRMs	P value†
All REDfly analysis CRMs	280	3.54E-11
Random non-coding	280	1
Blastoderm	51	6.53E-04
Non-blastoderm	207	1.02E-05
Mesoderm	24	0.78
Embryo	128	9.00E-07
Non-embryo	123	0.07
Larva	32	1
Neuronal	22	0.31

*See Figure S1-1 in Additional data file 1). Only CRMs uniquely assigned to the tissue or stage are included here. ^†Kolmogorov-Smirnov test. P values for subsets are Bonferroni-corrected. Values in bold are significant.