Table 5.
cDNA sequence isolated by GLGI from novel LongSAGE tags
| LongSAGE tag | Product size (bp)* | No. of UniGene matches | Abundance | |||||
| T33 | T65 | T90 | L33 | L65 | L90 | |||
| CCCCATTGTACTTGAAC | 116,81,92 | 10 | 0 | 8 | 5 | 5 | 6 | |
| CCCATTGTACTCGAACT | 117,214 | 1 | 0 | 2 | 1 | 4 | 3 | |
| CCCATTGTACCTGAACT | 134,402,116,151,73 | 3 | 0 | 2 | 0 | 1 | 3 | |
| CCCATTGTACTGGAACT | 106,74 | 2 | 0 | 0 | 0 | 0 | 0 | |
| CCCATTGTACTTGAGCT | 74,92,114 | 2 | 0 | 1 | 0 | 3 | 2 | |
| CCCATTGTACCTTGAAC | 121 | 1 | 0 | 1 | 1 | 0 | 0 | |
| CCCATTGTACTTGACTT | 115 | 1 | 0 | 1 | 0 | 1 | 1 | |
| CCCATTGTACTTGAACC | 136,116 | 5 | 1 | 4 | 12 | 4 | 11 | |
| CCCATTGTACTTGGACT | 102,128 | 3 | 0 | 3 | 0 | 8 | 2 | |
| CCCATTGTACTTGCACT | 118 | 1 | 0 | 0 | 0 | 0 | 0 | |
| ACAGGAACTCCTTGCCT | 104 | 1 | 0 | 0 | 0 | 0 | 0 | |
| TCTGGAGAAGTGGGGAG | 77 | 5 | 0 | 1 | 0 | 0 | 0 | |
| CAGTTCTCCCACCTTAT | 96 | 6 | 0 | 2 | 14 | 1 | 0 | |
| GGGCGTCTAAATGTGAA | 89,115,121 | 1 | 14 | 1 | 1 | 1 | 0 | |
| TTCTTGATCTCTTCCTG | 119,127 | 1 | 12 | 12 | 1 | 8 | 13 | |
| GCCACATCCTTTCTCCC | 189,161,116,98,145 | 1 | 10 | 11 | 0 | 6 | 3 | |
| GACGAGATGGAGTTCAC | 94,107,100 | 1 | 7 | 0 | 1 | 0 | 0 | |
| GATCGGGACATTGGGGC | 87,81 | 1 | 8 | 5 | 1 | 6 | 3 | |
| GAGAAAACGAAGACAAG | 136,65 | 2 | 12 | 12 | 0 | 6 | 5 | |
| GAAAATTGCCCCCCCCC | 113,77 | 1 | 7 | 2 | 0 | 0 | 0 | |
| GACTAGCAATTTCGGTT | 55,68 | 1 | 6 | 2 | 4 | 10 | 9 | |
| GGGCTGCTTTTTGTCAC | 58,156 | 1 | 7 | 2 | 1 | 1 | 2 | |
| TGCTAGATTGGAGTGGG | 93,124,150 | 1 | 6 | 1 | 2 | 8 | 4 | |
| AAGCTGTGGTTTGATCC | 82 | 13 | 5 | 13 | 10 | 6 | 8 | |
| AGACAGACAGTTGCTGG | 97,161 | 9 | 2 | 3 | 5 | 5 | 3 | |
| AGCATCCCAAACAAACA | 79,116 | 27 | 13 | 46 | 15 | 26 | 49 | |
| ATGGGCCGTTAATAAAG | 73 | 28 | 11 | 15 | 36 | 34 | 35 | |
| CAAACTCTTGCCCCGAT | 73 | 1,458 | 7 | 1 | 3 | 1 | 1 | 0 |
| CAGCAGGTGCTCAATAA | 106 | 32,297 | 14 | 5 | 2 | 9 | 10 | 3 |
| CCAACACTCATAGCAAT | 71,161,100 | 16 | 6 | 16 | 22 | 16 | 27 | |
| CCCATTGGACTTGAACT | 247 | 11 | 3 | 0 | 2 | 0 | 0 | |
| CCCATTGTACTTGAACT | 134 | 448 | 130 | 577 | 501 | 448 | 515 | |
| GAACGCCTAATAAAGCA | 106 | 32,126 | 9 | 2 | 5 | 7 | 1 | 8 |
| CCTGACCCCACACGCCT | 69 | 24 | 0 | 7 | 0 | 1 | 0 | |
| AGTAAACGGGCTGCTCC | 134 | 10 | 0 | 2 | 0 | 0 | 0 | |
| TAGAGGTGCTGTCTATG | 189,142 | 10 | 0 | 0 | 8 | 0 | 0 | |
| CTACTTTAGCACCTGCT | 218 | 8 | 0 | 10 | 4 | 7 | 9 | |
| TCAAGCCTAGCAGTCTA | 142 | 27 | 5 | 22 | 11 | 4 | 15 | |
| TGAATTTTGCATTCCAT | 122 | 27,615 | 14 | 2 | 8 | 7 | 8 | 3 |
| GTAGGGGAAGGAGGAGG | 109,96 | 14 | 5 | 11 | 0 | 0 | 0 | |
| GGCTTCGGCTTGTTTGC | 170,89 | 11 | 3 | 8 | 7 | 6 | 2 | |
| TGCCCTTTCCCCAAAGC | 94 | 11 | 1 | 4 | 3 | 3 | 4 | |
| ATCTGCCGTTAATAAAG | 89 | 947 | 207 | 81 | 211 | 167 | 220 | 219 |
| CTGATTGGAACTGTATT | 152 | 31,595 | 200 | 81 | 151 | 212 | 181 | 152 |
| GGCTTCGGCTTGTTTGA | 240 | 791 | 199 | 254 | 173 | 290 | 237 | 186 |
| GCCCTGGGGCCTCAATA | 92 | 37,210 | 111 | 158 | 96 | 118 | 123 | 75 |
| GATTCCGTGAAGGAACA | 73 | 19,414 | 54 | 56 | 67 | 78 | 68 | 57 |
| AGGTTGCGGGTTCGGTC | 113 | 23,946 | 54 | 65 | 35 | 83 | 86 | 62 |
| GTTCGTGCCAAATTCCG | 228 | 6,701 | 51 | 82 | 29 | 39 | 36 | 44 |
| AAGATCAAGATTATTGC | 159 | 10,316 | 22 | 47 | 36 | 9 | 41 | 20 |
| CAGGGGCTTCAGTTGAT | 364,239 | 0 | 0 | 0 | 29 | 23 | 32 | |
| ATTAAGAGGGACGGCCG | 146 | 19 | 14 | 6 | 1 | 22 | 10 | |
| CACGCTTTCTTCAAAGC | 302 | 3 | 5 | 13 | 24 | 9 | 34 | |
| GCGTGAATGTGAGCAGG | 127,149 | 2 | 11 | 8 | 1 | 3 | 4 | |
| CGTGGGCAAAGCTGAAG | 122,147 | 8 | 24 | 11 | 14 | 22 | 10 | |
| CTCGTTCTGAAATAAAG | 68,168,186 | 1 | 19 | 76 | 1 | 37 | 70 | |
| AGGATGCCGGTACGATC | 189,170,107 | 7 | 23 | 7 | 14 | 18 | 7 | |
| TCTCAGAATTAGCTTTG | 89 | 22,100 | 5 | 20 | 17 | 3 | 14 | 20 |
| GTTTTGCTGCTTCCCAA | 132 | 2 | 18 | 9 | 0 | 8 | 15 | |
| CCTGCCCTGCCCTATTC | 77,68 | 4 | 16 | 0 | 4 | 3 | 0 | |
| AGCTATGGCTTAGGCCA | 161,126 | 1 | 11 | 3 | 0 | 1 | 0 | |
| TTTACTCAACCTTTGGT | 96,169 | 13,955 | 3 | 28 | 37 | 1 | 21 | 21 |
| TGGGCAGCCTTCCCTTC | 221 | 1 | 11 | 4 | 0 | 2 | 1 | |
| CCAGAAGTAAGGCTTTC | 123 | 5 | 16 | 10 | 0 | 0 | 0 | |
| AATCCAGGATGCGGCTG | 70,173 | 1 | 9 | 0 | 0 | 4 | 3 | |
| GCATCTAGCTCCTCATT | 151 | 1 | 16 | 8 | 1 | 2 | 2 | |
| TCGGACGTACATCGTTA | 145 | 4 | 13 | 10 | 14 | 9 | 7 | |
All cDNA sequences obtained from GLGI analysis were deposited in the NCBI database (Additional data file 8). *Multiple values indicate that more than one sequence was obtained from a tag in the GLGI experiment, and these sequences were of different lengths.