Table 1. Selected results for dUTPase from C. jejuni (§4.1).
The first column gives the search model used, following the notation described in §4. The column ‘Seq. id.’ gives the FASTA sequence identity against the target for the chain. The column ‘RFZ/TFZ’ gives the Z scores from the Phaser rotation and translation functions for the second copy located. The column ‘R free,i/R free,f’ gives the initial and final R free values from restrained refinement in REFMAC. The column ‘CCi/CCf’ gives the initial and final correlation coefficient for medium E values from ACORN. The correctness of the solution indicated in the final column is based on comparison with the final structure. See text for a discussion of the results.
| Search model | Seq id. (%) | RFZ/TFZ | Rfree,i/Rfree,f | CCi/CCf | Solution |
|---|---|---|---|---|---|
| 1ogl_A_CHNSAW | 38.3 | 3.3/6.1 | 0.567/0.586 | — | No |
| 1ogk_A_CHNSAW | 37.3 | 3.3/5.0 | 0.564/0.572 | — | No |
| 1ogk_B_CHNSAW | 38.4 | 4.9/6.6 | 0.568/0.516 | 0.075/0.137 | Yes |
| 1ogk_D_CHNSAW | 38.3 | 4.2/10.1 | 0.562/0.509 | 0.109/0.174 | Yes |
| 1ogk_E_CHNSAW | 38.2 | 4.7/11.6 | 0.571/0.505 | 0.078/0.156 | Yes |