TABLE 3.
Genetic potential for metabolic versatility
| Process | Protein(s) | GenBank accession no. |
|---|---|---|
| Putative electron donation | ||
| Sulfur oxidation | SoxTRSVWXYZABCDEFGH | ZP_01225759 to ZP_01225774 |
| CO oxidation | Aerobic CO dehydrogenase | ZP_01227909 to ZP_01227911, ZP_01228739 |
| Methylotrophy | ||
| Methanol sensing | MoxY | ZP_01228286 |
| Methanol regulation | MoxX | ZP_01228287 |
| Methanol oxidation | Methanol dehydrogenase | ZP_01228289 to ZP_01228291, ZP_01228705 |
| Formaldehyde oxidation | Formaldehyde dehydrogenase | ZP_01228291, ZP_01228274, ZP_01225718, ZP_01227698 |
| Formate oxidation | Formate dehydrogenase | ZP_01228971, ZP_01226368, ZP_01226369, ZP_01226481, ZP_01226482 |
| Carbon fixation | ||
| Calvin cycle | CbbRFPTALSXE | ZP_01227925 to ZP_01227933 |
| Calvin cycle? | RubisCO, large subunit | ZP_01226398 |
| Unknown | RubisCO-like protein | ZP_01229072 |
| Mn(II) oxidation | MCO (MoxA1) | ZP_01227197 |
| MCO (MoxA2) | ZP_01225555 | |
| MCO | ZP_01225909 | |
| MCO-like protein | ZP_01227202 | |
| Extracellular hemolysin-type Ca2+-binding peroxidase | ZP_01225898 | |
| Type II secretion | ZP_01225900 to ZP_01225907 | |
| PQQ biosynthesis | ZP_01226711 to ZP_01226713 |