TABLE 1.
Soil metagenomic libraries constructed with or without formamide treatment
Library name | Library type | Nycodenz isolationa | Formamide treatment | No. of clones | Approx % insert | Avg insert size (kb) |
---|---|---|---|---|---|---|
AK 5 | BAC | Yes | No | 2,200 | 70 | 33 |
AK 7 | BAC | Yes | No | 2,300 | 60 | 47 |
AK 8 | BAC | Yes | No | 2,700 | 70 | 9 |
AK 9 | BAC | Yes | No | 2,400 | 25 | 20 |
AK 13 | BAC | No | No | 8,400 | 10 | 29 |
AK 17 | BAC | No | No | 1,000 | 20 | 29 |
AK 15 | BAC | No | Yes | 32,100 | 60 | 20 |
AK 19 | Fosmid | No | Yes | 3,300 | 98 | 31 |
AK 20 | BAC | No | Yes | 48,100 | 80 | 8 |
AK 21 | Fosmid | No | Yes | 333,700 | 100 | 30 |
AK 22 | Fosmid | No | Yes | 50,500 | 100 | 30 |
AK 23 | Fosmid | No | Yes | 8,200 | 100 | 30 |
In some cases, microbial cells were isolated over a Nycodenz layer as previously described (22).