TABLE 3.
Primary gene annotations for pSF118-20 and pSF118-44 of L. salivarius UCC118
| pSF118-20
|
pSF118-44
|
||
|---|---|---|---|
| Locus tag | Annotationa | Locus tag | Annotation |
| LSL_1960 | Putative nickase, TraA-like | LSL_1987 | Nicotinate phosphoribosyltransferase (EC 2.4.2.11) |
| LSL_1961 | Conserved hypothetical protein | LSL_1988 | Phosphohydrolase (MutT/nudix family protein) |
| LSL_1962 | Conserved hypothetical protein | LSL_1989 | Transcriptional regulator, TetR family |
| LSL_1963 | Conserved hypothetical protein | LSL_1990 | Pseudogene |
| LSL_1964 | Hypothetical protein | LSL_1991 | Hypothetical protein |
| LSL_1965 | RepA | LSL_1992 | Hypothetical protein |
| LSL_1966 | Hypothetical protein | LSL_1993 | Pseudogene |
| LSL_1967 | Plasmid partition protein | LSL_1994 | Antitoxin of TA stability system |
| LSL_1968 | Resolvase | LSL_1995 | Toxin of TA stability system |
| LSL_1969 | Pyridine nucleotide-disulfide oxidoreductase family protein | LSL_1996 | Toxin |
| LSL_1970 | Hypothetical protein | LSL_1997 | Putative antitoxin |
| LSL_1971 | Hypothetical protein | LSL_1998 | Plasmid partition protein |
| LSL_1972 | Hypothetical membrane-spanning protein | LSL_1999 | Hypothetical protein |
| LSL_1973 | General stress protein, Gls24 family | LSL_2000 | Replication initiator protein |
| LSL_1974 | Hypothetical membrane-spanning protein | LSL_2001 | Conserved hypothetical protein |
| LSL_1975 | Hypothetical cytosolic protein | LSL_2002 | Conserved hypothetical protein |
| LSL_1976 | Conserved hypothetical protein | LSL_2003 | Conserved hypothetical protein |
| LSL_1977 | Hypothetical protein | LSL_2004 | Conserved hypothetical protein |
| LSL_1978 | Transposase ISLasa5b, IS3 family | LSL_2005 | Nickase |
| LSL_1979 | Putative UV-resistance-like protein | LSL_2006 | Hypothetical protein |
| LSL_1980 | Hypothetical protein | LSL_2007 | Transcriptional regulator, MarR family |
| LSL_1981 | Hypothetical protein | LSL_2008 | Quinone oxidoreductase |
| LSL_1982 | Hypothetical protein | LSL_2009 | Hypothetical protein |
| LSL_1983 | Hypothetical protein | LSL_2010 | Transposase ISLasa18a, IS256 family |
| LSL_1984 | PemI-like protein | LSL_2011 | ABC transporter, ATP-binding protein |
| LSL_1985 | PemK protein | LSL_2012 | Putative ABC transporter, integral membrane protein |
| LSL_1986 | Transposase ISLasa17c, IS256 family | LSL_2013 | Putative transcriptional regulator |
| LSL_2014 | Conserved hypothetical protein | ||
| LSL_2015-LSL_2016 | Pseudogene | ||
| LSL_2017 | Hypothetical protein | ||
| LSL_2018 | Hypothetical protein | ||
| LSL_2019 | Hypothetical protein | ||
| LSL_2020 | Pyridine nucleotide-disulfide oxidoreductase family protein | ||
| LSL_2020b | Pseudogene | ||
| LSL_2021 | Hypothetical membrane-spanning protein | ||
| LSL_2022 | Cobalt transport protein CbiQ | ||
| LSL_2023 | Cobalt transport protein CbiQ | ||
| LSL_2024 | Cobalt transport ATP-binding protein CbiO | ||
| LSL_2025 | Hypothetical protein | ||
| LSL_2026 | Glycine betaine transport system permease protein/glycine betaine-binding protein | ||
| LSL_2027 | Glycine betaine transport ATP-binding protein | ||
| LSL_2028 | Glutathione reductase | ||
| LSL_2029 | Resolvase | ||
| LSL_2030 | Hypothetical protein | ||
| LSL_2031 | Hypothetical protein | ||
| LSL_2032 | DNA-damage-inducible protein J | ||
| LSL_2033 | Hypothetical protein | ||
| LSL_2034 | Hypothetical protein | ||
| LSL_2035 | Conserved hypothetical protein | ||
| LSL_2036 | Hypothetical protein | ||
| LSL_2037 | Hypothetical protein | ||
| LSL_2038 | Transcriptional regulator, PadR family | ||
a
BLAST top hit as of June 2007.