TABLE 1.
Twenty-two Salmonella serovar Typhi, Paratyphi A, and Paratyphi B reference strains and 24 “negative control” Salmonella strains consisting of other serovars used for preliminary validation of the multiplex PCR assays
| Strain | Salmonella serovar | O group | Phase 1 H flagellar antigen(s) | Vi capsular antigen status | dT fermentation statusa
|
|
|---|---|---|---|---|---|---|
| Jordan's | Kauffmann's | |||||
| Ty2 | Typhi | D | d | + | NT | NT |
| CVD 908-htrA | Typhi | D | d | + | NT | NT |
| CDC 06-0418 | Typhi | D | j | + | NT | NT |
| CDC 01-0274 | Typhi | D | j | + | NT | NT |
| CDC 2433 | Typhi | D | j | + | NT | NT |
| CDC 96-0344 | Typhi | D | j | + | NT | NT |
| 01-0020 | Paratyphi A | A | a | − | NT | NT |
| 01-0220 | Paratyphi A | A | a | − | NT | NT |
| 02-0209 | Paratyphi A | A | a | − | NT | NT |
| 02-0532 | Paratyphi A | A | a | − | NT | NT |
| 04-0529 | Paratyphi A | A | a | − | NT | NT |
| 04-0571 | Paratyphi A | A | a | − | NT | NT |
| 05-0741 | Paratyphi A | A | a | − | NT | NT |
| 00-0391 | Paratyphi B | B | b | − | − | − |
| 02-0303 | Paratyphi B | B | b | − | − | − |
| 04-0137 | Paratyphi B | B | b | − | − | − |
| 04-0615 | Paratyphi B | B | b | − | − | − |
| 00-0301 | Paratyphi B | B | b | − | + | + |
| 01-0399 | Paratyphi B | B | b | − | + | + |
| 03-0451 | Paratyphi B | B | b | − | + | + |
| 04-0126 | Paratyphi B | B | b | − | + | + |
| 01-0516 | Paratyphi B | B | b | − | + | + |
| CDC 32 | Paratyphi C | C1 | c | − | NT | NT |
| CDC 33 | Paratyphi C | C1 | c | − | NT | NT |
| 06-0868 | Choleraesuis (sensu stricto) | C1 | c | − | NT | NT |
| 06-0894 | Choleraesuis subsp. Kunzendorf | C1 | c | − | NT | NT |
| 06-0707 | Dublin | D | g, p | − | NT | NT |
| State lab 81.23500 | Typhimurium | B | i | − | NT | NT |
| CDC 07-0100 | Braenderup | C1 | e, h | − | NT | NT |
| CDC 07-0222 | Tennessee | C1 | z29 | − | NT | NT |
| CDC 07-0230 | Tennessee | C1 | z29 | − | NT | NT |
| CDC 07-0108 | Orion | E1 | y | − | NT | NT |
| CDC 07-0044 | Newport | C2 | e, h | − | NT | NT |
| CDC 07-0042 | Montevideo | C1 | g, m, s | − | NT | NT |
| CDC 07-0039 | Bardo | C2 | e.h | − | NT | NT |
| CDC 07-0021 | Give | E1 | l, v | − | NT | NT |
| CDC 07-0115 | Meleagridis | E1 | e.h | − | NT | NT |
| CDC 07-0124 | Mbandaka | C1 | z10 | − | NT | NT |
| CDC 07-0217 | Oranienburg | C1 | m, t | − | NT | NT |
| CDC 07-0223 | Virginia | C2 | d | − | NT | NT |
| CDC 07-0001 | Cotham | O28 | i | − | NT | NT |
| CDC 07-0006 | Edinburg | C1 | b | − | NT | NT |
| CDC 07-00014 | Livingstone | C1 | d | − | NT | NT |
| CDC 07-0019 | Inverness | O38 | k | − | NT | NT |
| CDC 07-0094 | Choleraesuis subsp. Kunzendorf | C1 | c | − | NT | NT |
| CVD SE | Enteritidis | D | g, m | − | NT | NT |
a
NT, not tested.