Table 3.
Expression of control genes in human cells
| Lymphocytes | Dendritic cells | Myeloid cells | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Probe set ID | Genes | NK | CD8 T | CD4 T | B | pDC | BDCA1 | BDCA3 | Mono | Neu |
| 206804_at | CD3G | 858 ± 71 | 1,760 ± 241 | 1,975 ± 132 | 53 ± 6 | <50 | <50 | <50 | <50 | 52 ± 4 |
| 213539_at | CD3D | 5,413 ± 238 | 7,134 ± 635 | 6,291 ± 285 | 276 ± 24 | <50 | <50 | 51 ± 2 | 112 ± 9 | 276 ± 4 |
| 205456_at | CD3E | 247 ± 21 | 569 ± 67 | 679 ± 91 | <50 | <50 | <50 | <50 | <50 | <50 |
| 210031_at | CD3Z | 8,688 ± 181 | 5,223 ± 218 | 4,749 ± 123 | 2,996 ± 217 | 56 ± 10 | 60 ± 17 | 54 ± 7 | 914 ± 96 | 132 ± 15 |
| 209671_x_at | TCR@ | 147 ± 16 | 3,127 ± 260 | 3,462 ± 170 | 71 ± 7 | <50 | <50 | <50 | <50 | 111 ± 16 |
| 205758_at | CD8A | 911 ± 26 | 5,259 ± 217 | 67 ± 10 | 79 ± 16 | <50 | <50 | <50 | <50 | 99 ± 7 |
| 207979_s_at | CD8B | 77 ± 9 | 3,596 ± 299 | <50 | <50 | <50 | <50 | <50 | <50 | 53 ± 5 |
| 203547_at | CD4 | <50 | <50 | 391 ± 20 | 83 ± 20 | 1,301 ± 119 | 1,004 ± 74 | 278 ± 61 | 205 ± 34 | <50 |
| 206398_s_at | CD19 | <50 | 51 ± 1 | <50 | 1,726 ± 115 | <50 | <50 | <50 | 57 ± 12 | <50 |
| 212843_at | NCAM1 (CD56) | 2,074 ± 96 | 144 ± 14 | 65 ± 2 | 135 ± 9 | <50 | <50 | 82 ± 17 | 52 ± 3 | <50 |
| 207314_x_at | KIR3DL2 | 3,131 ± 172 | 454 ± 14 | 227 ± 18 | 265 ± 16 | <50 | <50 | <50 | 59 ± 8 | <50 |
| 208203_x_at | KIR2DS5 | 3,472 ± 140 | 444 ± 7 | 236 ± 10 | 284 ± 14 | <50 | <50 | <50 | <50 | <50 |
| 239975_at | HLA-DPB2 | <50 | <50 | <50 | 63 ± 22 | 777 ± 701 | 1,565 ± 519 | 2,056 ± 577 | <50 | <50 |
| 210184_at | ITGAX (CD11c) | 1,017 ± 50 | 112 ± 37 | 166 ± 17 | 752 ± 45 | 74 ± 21 | 2,151 ± 430 | 729 ± 98 | 1,284 ± 115 | 2,133 ± 196 |
| 210313_at | LILRA4 (ILT7) | 226 ± 10 | 117 ± 13 | 346 ± 42 | 1,109 ± 76 | 7,916 ± 612 | 230 ± 16 | 1,659 ± 1,183 | 524 ± 41 | <50 |
| 206148_at | IL3RA (CD123) | 84 ± 3 | 59 ± 8 | 91 ± 2 | 324 ± 9 | 4,728 ± 365 | 61 ± 10 | 116 ± 110 | 120 ± 3 | 74 ± 12 |
| 1552552_s_at | CLEC4C (BDCA2) | 93 ± 6 | 61 ± 5 | 99 ± 4 | 408 ± 9 | 6,789 ± 737 | 76 ± 39 | 859 ± 434 | 217 ± 8 | 175 ± 25 |
| 205987_at | CD1C (BDCA1) | 76 ± 8 | 61 ± 12 | 159 ± 8 | 1,715 ± 85 | 64 ± 23 | 8,313 ± 272 | 722 ± 845 | 560 ± 59 | <50 |
| 204007_at | FCGR3B (CD16) | 459 ± 54 | 115 ± 24 | 65 ± 5 | 322 ± 46 | 63 ± 23 | <50 | 51 ± 1 | 160 ± 11 | 5,554 ± 57 |
| 201743_at | CD14 | 94 ± 3 | 139 ± 5 | 343 ± 5 | 1,274 ± 113 | <50 | 202 ± 183 | <50 | 7,638 ± 446 | 4,621 ± 374 |
| 205786_s_at | ITGAM (CD11b) | 5,688 ± 116 | 1,980 ± 147 | 1,161 ± 71 | 2,513 ± 117 | 360 ± 184 | 703 ± 28 | 86 ± 63 | 5,541 ± 193 | 5,232 ± 576 |
| 208982_at | PECAM1 (CD31) | 2,232 ± 48 | 2,144 ± 91 | 1,487 ± 58 | 4,644 ± 102 | 3,834 ± 601 | 2,825 ± 290 | 2,680 ± 363 | 5,479 ± 219 | 7,699 ± 853 |
| 205898_at | CX3CR1 | 10,056 ± 53 | 6,633 ± 232 | 4,351 ± 170 | 6,055 ± 263 | 262 ± 45 | 1,296 ± 84 | 362 ± 419 | 5,717 ± 451 | 616 ± 21 |
| 39402_at | IL1B | 69 ± 6 | 72 ± 7 | 52 ± 3 | 209 ± 27 | <50 | 195 ± 131 | 69 ± 27 | 198 ± 9 | 2,920 ± 183 |
| 202859_x_at | IL8 | 95 ± 7 | 77 ± 6 | 72 ± 5 | 385 ± 26 | 218 ± 185 | 90 ± 9 | 680 ± 561 | 310 ± 17 | 8,685 ± 776 |
| 207094_at | IL8RA | 199 ± 30 | 74 ± 8 | 81 ± 12 | 82 ± 2 | <50 | 61 ± 9 | 67 ± 1 | 90 ± 1 | 4,784 ± 521 |
Mono, monocyte; neu, neutrophil.