Table 1.
Overall statistics of generated clusters from all trans fragments
| FL | Total fragments | Total number of clusters with >2 fragments (% fragments clustered) | Largest cluster | |
|---|---|---|---|---|
| Size (% of total fragments) | Compactness* (SD) | |||
| 5 | 455,305 | 5,544 (98.8) | 121,220 (27) | 2.92 (1.8) |
| 6 | 446,479 | 8,466 (97.3) | 106,020 (24) | 2.62 (1.5) |
| 8 | 429,793 | 15,617 (92.1) | 79,646 (19) | 2.23 (1.2) |
| 10 | 414,207 | 22,120 (83.7) | 58,150 (14) | 2.0 (1.0) |
| 12 | 399,615 | 26,228 (72.9) | 40,935 (10) | 1.81 (0.87) |
| 14 | 385,866 | 26,778 (61.2) | 28,313 (7) | 1.68 (0.77) |
| 16 | 369,760 | 25,455 (50.8) | 19,469 (5) | 1.56 (0.70) |
| 18 | 360,537 | 23,302 (41.2) | 13,519 (4) | 1.45 (0.63) |
| 20 | 348,824 | 21,079 (33.4) | 9,551 (3) | 1.37 (0.59) |
| 22 | 337,679 | 18,646 (28.8) | 6,804 (2) | 1.29 (0.55) |
| 24 | 327,010 | 16,132 (21.4) | 4,966 (2) | 1.22 (0.52) |
*(Average of the distances of all fragments in a cluster from its center)/(2 × FL). SD, standard deviation.