Table 2. Association of genomic polymorphisms with ethnicity.
Ethnicity |
||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Caucasian | Hispanic | Black | Asian | |||||||
Factors | No. of patients | N | % | N | % | N | % | N | % | P-value* |
XPD-751 | <0.001 | |||||||||
Lys/Lys | 40 | 19 | 25 | 8 | 57 | 4 | 67% | 10 | 91 | |
Lys/Gln | 53 | 46 | 61 | 4 | 29 | 2 | 33% | 1 | 9 | |
Gln/Gln | 13 | 11 | 14 | 2 | 14 | 0 | 0% | 0 | 0 | |
XPD-156 | 0.14 | |||||||||
A/A | 14 | 12 | 16 | 1 | 8 | 0 | 0% | 1 | 9 | |
C/A | 59 | 43 | 58 | 7 | 54 | 1 | 17% | 8 | 73 | |
C/C | 30 | 19 | 26 | 5 | 38 | 5 | 83% | 2 | 18 | |
Unknown | 3 | 2 | 1 | |||||||
XPA-5′ | 0.14 | |||||||||
G/G | 24 | 18 | 27 | 4 | 33 | 3 | 60% | 0 | 0 | |
A/G | 53 | 37 | 56 | 7 | 58 | 2 | 40% | 7 | 64 | |
A/A | 16 | 11 | 17 | 1 | 8 | 0 | 0% | 4 | 36 | |
Unknown | 13 | 10 | 2 | 1 | ||||||
ERCC1-118 | 0.002 | |||||||||
C/C | 30 | 15 | 20 | 6 | 43 | 6 | 100 | 4 | 36 | |
C/T | 45 | 34 | 45 | 5 | 36 | 0 | 0 | 6 | 55 | |
T/T | 31 | 27 | 36 | 3 | 21 | 0 | 0 | 1 | 9 | |
XRCC1-399 | 0.63 | |||||||||
Arg/Arg | 44 | 29 | 39 | 5 | 36 | 3 | 50 | 7 | 64 | |
Gln/Arg | 51 | 39 | 52 | 8 | 57 | 2 | 33 | 3 | 27 | |
Gln/Gln | 10 | 7 | 9 | 1 | 7 | 1 | 20 | 1 | 9 | |
Unknown | 1 | 1 | ||||||||
TS-3′UTR | 0.030 | |||||||||
+6BP/+6BP | 37 | 31 | 42 | 4 | 31 | 1 | 17 | 1 | 9 | |
+6BP/−6BP | 52 | 35 | 48 | 9 | 69 | 3 | 50 | 6 | 55 | |
-6BP/−6BP | 13 | 7 | 10 | 0 | 0 | 2 | 33 | 4 | 36 | |
Unknown | 4 | 3 | 1 | |||||||
TS-5′UTR | 0.25 | |||||||||
3R/3R | 43 | 30 | 39 | 4 | 31 | 1 | 17 | 8 | 73 | |
2R/3R | 46 | 34 | 45 | 7 | 54 | 3 | 50 | 3 | 27 | |
2R/2R | 16 | 12 | 16 | 2 | 15 | 2 | 33 | 0 | 0 | |
2/4 | 1 | 1 | ||||||||
GSTP1-105 | 0.61 | |||||||||
Val/Val | 10 | 7 | 9 | 1 | 7 | 1 | 17 | 1 | 9 | |
Ile/Val | 47 | 35 | 46 | 6 | 43 | 4 | 67 | 3 | 27 | |
Ile/Ile | 49 | 34 | 45 | 7 | 50 | 1 | 17 | 7 | 64 | |
GSTT1 | 1.00 | |||||||||
Positive | 75 | 53 | 72 | 10 | 77 | 4 | 80 | 8 | 73 | |
Negative | 27 | 21 | 28 | 3 | 23 | 1 | 20 | 3 | 27 | |
Unknown | 4 | 2 | 1 | 1 | ||||||
GSTM1 | 0.14 | |||||||||
Positive | 54 | 39 | 53 | 9 | 69 | 4 | 80 | 3 | 27 | |
Negative | 48 | 35 | 47 | 4 | 31 | 1 | 20 | 8 | 73 | |
Unknown | 4 | 2 | 1 | 1 |
GSTP=glutathione S-transferase; TS=thymidylate synthase; UTR=untranslated region.
P-value is based on Fisher's exact test.