Table 3.
Gene | Synonymous | Non-synonymous |
Ribosomal | ||
rpl12 | - | 1 |
rpl19 | - | 1 |
rps12 | 1 | - |
rps14 | - | 1 |
rps31 | - | 1 |
Translational | ||
rpoB | - | 2 |
rpoC2 | 2 | 1 |
Photosystem/energy | ||
psaA | 2 | - |
psaD | 1 | - |
psaE | - | 1 |
psbB | 1 | - |
ycf04A | 1 | - |
atpA | - | 1 |
atpI | 1 | - |
petD | 1 | - |
Metabolic | ||
clpC | 1 | - |
ftsH | 1 | - |
ilvB | 1 | - |
secA | 1 | 1 |
secY | 1 | - |
rbcL* (×2) | 2 | 2 |
tsg1 | 1 | - |
ycf24B | 1 | - |
ycf/orf | ||
ycf36 | 1 | - |
ycf39 | - | 1 |
ycf46 | - | 1 |
ycf66 | 1 | - |
orf006* (×2) | 4 | - |
orf021 | 1 | 1 |
orf026 | 2 | 5 |
orf041 | - | 5 |
Highly impacted genes | ||
XerCC | 2 | 10 |
orf014D | - | 1 |
* located on the inverted repeat
A photosystem 1 assembly protein
B ABC transporter protein
C within the first 275 AAs
D within the first 65 AAs