Table 3.
Presence of Single Nucleotide Polymorphisms in protein coding genes between H. akashiwo CCMP452 and NIES293
| Gene | Synonymous | Non-synonymous |
| Ribosomal | ||
| rpl12 | - | 1 |
| rpl19 | - | 1 |
| rps12 | 1 | - |
| rps14 | - | 1 |
| rps31 | - | 1 |
| Translational | ||
| rpoB | - | 2 |
| rpoC2 | 2 | 1 |
| Photosystem/energy | ||
| psaA | 2 | - |
| psaD | 1 | - |
| psaE | - | 1 |
| psbB | 1 | - |
| ycf04A | 1 | - |
| atpA | - | 1 |
| atpI | 1 | - |
| petD | 1 | - |
| Metabolic | ||
| clpC | 1 | - |
| ftsH | 1 | - |
| ilvB | 1 | - |
| secA | 1 | 1 |
| secY | 1 | - |
| rbcL* (×2) | 2 | 2 |
| tsg1 | 1 | - |
| ycf24B | 1 | - |
| ycf/orf | ||
| ycf36 | 1 | - |
| ycf39 | - | 1 |
| ycf46 | - | 1 |
| ycf66 | 1 | - |
| orf006* (×2) | 4 | - |
| orf021 | 1 | 1 |
| orf026 | 2 | 5 |
| orf041 | - | 5 |
| Highly impacted genes | ||
| XerCC | 2 | 10 |
| orf014D | - | 1 |
* located on the inverted repeat
A photosystem 1 assembly protein
B ABC transporter protein
C within the first 275 AAs
D within the first 65 AAs