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. Author manuscript; available in PMC: 2009 May 1.
Published in final edited form as: J Magn Reson. 2008 Feb 1;192(1):37–47. doi: 10.1016/j.jmr.2008.01.011

Table 3.

Average correlations 100Cxy between features and S2

Feature description Position, k
−6 −5 −4 −3 −2 −1 0 +1 +2 +3 +4 +5 +6

exp(rkO/1A˚) 5.0 13.6 23.0 29.1 34.4 38.8 32.8 21.5 12.2 1.8 −3.7 −11.8 −11.7
exp(rkO/2A˚) 8.1 16.9 27.2 33.7 40.5 44.8 38.8 24.1 13.6 1.7 −6.5 −14.6 −14.0
exp(rkO/3A˚) 9.2 18.0 28.1 34.7 41.6 45.8 40.2 24.9 14.2 2.2 −7.3 −15.2 −14.6
exp(rkO/4A˚) 9.5 18.3 28.2 34.9 41.8 45.9 40.7 25.4 14.6 2.7 −7.4 −15.1 −14.7
exp(rkO/5A˚) 9.5 18.3 28.1 34.9 41.8 45.9 40.9 25.7 14.9 3.1 −7.2 −14.9 −14.6
exp(rkO/7A˚) 9.4 18.2 28.0 34.9 41.7 45.8 41.1 26.1 15.4 3.7 −7.0 −14.4 −14.4
exp(rkO/10A˚) 9.3 18.0 27.8 34.8 41.7 45.8 41.3 26.5 15.8 4.2 −6.7 −13.9 −14.2

1/exp(rkO/1A˚) 5.0 13.6 23.0 29.1 34.4 38.8 32.8 21.5 12.2 1.8 −3.7 −11.8 −11.7
1/exp(rkO/2A˚) −6.4 −14.0 −23.0 −33.1 −42.3 −51.8 −45.2 −26.1 −16.9 −5.0 4.8 12.2 11.2
1/exp(rkO/3A˚) −8.4 −16.1 −25.9 −36.1 −45.1 −53.9 −48.1 −29.1 −19.2 −6.0 5.0 12.4 12.4
1/exp(rkO/4A˚) −9.2 −17.0 −27.2 −37.2 −45.9 −53.9 −48.7 −30.3 −20.2 −6.7 5.0 12.4 12.9
1/exp(rkO/5A˚) −9.5 −17.4 −27.8 −37.6 −46.1 −53.5 −48.6 −30.7 −20.5 −7.0 5.0 12.4 13.2
1/exp(rkO/7A˚) −9.7 −17.7 −28.3 −37.7 −45.7 −52.4 −47.8 −30.7 −20.5 −7.1 5.0 12.3 13.3
1/exp(rkO/10A˚) −9.6 −17.8 −28.4 −37.4 −45.1 −51.1 −46.6 −30.2 −19.9 −7.0 5.1 12.3 13.4

exp(rkH/1A˚) −4.3 −1.2 2.7 8.1 15.7 26.6 36.0 35.0 33.9 23.0 18.3 9.1 8.7
exp(rkH/2A˚) −3.0 2.5 9.9 17.8 26.2 39.2 48.3 43.0 36.9 24.5 15.4 4.0 1.1
exp(rkH/3A˚) −2.0 4.2 12.4 21.0 29.4 41.5 49.4 42.8 35.1 23.0 12.9 1.6 −2.2
exp(rkH/4A˚) −1.6 4.7 13.2 21.9 30.2 41.7 49.0 42.1 33.9 22.3 11.8 0.9 −3.4
exp(rkH/5A˚) −1.4 4.9 13.4 22.2 30.5 41.6 48.6 41.6 33.3 21.9 11.3 0.7 −3.8
exp(rkH/7A˚) −1.4 4.9 13.5 22.4 30.6 41.4 48.1 41.2 32.8 21.6 10.9 0.7 −4.1
exp(rkH/10A˚) −1.4 4.9 13.4 22.4 30.6 41.3 47.7 40.9 32.5 21.5 10.7 0.8 −4.2

1/exp(rkH/1A˚) 2.9 0.2 −4.2 −9.8 −17.8 −31.4 −39.3 −39.0 −37.1 −23.8 −16.9 −8.2 −5.9
1/exp(rkH/2A˚) 2.5 −2.5 −9.3 −17.6 −27.4 −43.0 −52.5 −47.9 −42.8 −27.2 −16.2 −5.4 −1.2
1/exp(rkH/3A˚) 1.8 −3.9 −11.7 −21.6 −31.3 −46.5 −55.7 −49.5 −42.5 −27.0 −15.0 −3.7 1.5
1/exp(rkH/4A˚) 1.5 −4.5 −12.7 −23.0 −32.6 −47.1 −55.8 −49.1 −41.4 −26.7 −14.3 −3.1 2.6
1/exp(rkH/5A˚) 1.3 −4.8 −13.1 −23.6 −33.1 −47.0 −55.2 −48.3 −40.4 −26.4 −13.9 −2.8 3.1
1/exp(rkH/7A˚) 1.2 −5.0 −13.5 −24.0 −33.2 −46.2 −53.8 −46.9 −38.9 −25.8 −13.4 −2.6 3.4
1/exp(rkH/10A˚) 1.3 −5.0 −13.6 −23.9 −32.9 −45.2 −52.3 −45.5 −37.3 −24.9 −12.7 −2.3 3.6

sigm(3A˚rkH) −4.2 −0.5 5.1 11.1 19.2 31.9 41.5 38.9 36.2 24.5 18.2 7.9 6.4
sigm(4A˚rkH) −4.1 0.3 6.9 13.4 21.6 34.8 44.2 40.4 36.4 24.5 17.2 6.2 4.2
sigm(5A˚rkH) −3.6 1.7 9.0 16.1 24.3 37.6 46.4 41.2 35.8 23.8 15.4 4.1 1.5
sigm(7A˚rkH) −2.2 4.4 12.3 20.5 28.2 40.5 48.1 41.2 33.3 21.8 11.9 0.6 −2.8
sigm(10A˚rkH) −0.1 5.6 13.8 22.4 29.7 40.2 46.9 39.3 30.8 20.0 9.6 −1.0 −5.3

1/sigm(3A˚rkH) 3.0 −0.4 −5.5 −11.8 −20.6 −35.1 −44.0 −42.0 −39.5 −25.6 −17.1 −7.5 −4.7
1/sigm(4A˚rkH) 3.1 −1.0 −6.8 −13.7 −22.8 −37.9 −47.2 −43.8 −40.6 −26.3 −16.9 −6.6 −3.4
1/sigm(5A˚rkH) 3.1 −1.8 −8.4 −16.2 −25.6 −41.2 −50.7 −45.8 −41.2 −26.4 −16.1 −5.3 −1.7
1/sigm(7A˚rkH) 2.3 −3.8 −11.3 −21.0 −30.1 −45.7 −55.3 −48.1 −40.8 −25.6 −13.9 −2.8 1.9
1/sigm(10A˚rkH) 0.5 −5.2 −13.2 −23.9 −32.4 −46.5 −55.6 −47.9 −39.4 −24.9 −12.7 −1.6 4.3

hard(3A˚rkH) −0.2 −0.8 −3.3 0.7 4.4 12.6 17.6 20.8 21.5 14.1 12.3 9.3 12.9
hard(4A˚rkH) −5.2 −2.8 0.6 5.6 13.2 22.6 31.5 31.5 32.3 22.7 19.1 10.5 9.8
hard(5A˚rkH) −3.7 −1.5 4.6 7.8 15.3 25.5 33.7 32.7 31.4 21.3 16.4 7.3 6.7
hard(7A˚rkH) −4.6 3.0 11.2 19.1 26.8 39.3 46.3 39.9 32.7 20.7 11.6 0.8 −2.0
hard(10A˚rkH) 0.1 5.8 13.3 21.4 28.5 38.8 45.8 38.2 30.1 19.8 9.5 −1.2 −5.0

exp(rkN/3A˚)(BB) −1.9 4.8 13.8 23.5 33.3 44.7 50.6 43.4 34.1 22.1 11.3 0.5 −5.2
1/hard(7A˚rkC)(all) −0.1 −7.6 −16.5 −26.8 −38.1 −53.5 −51.1 −36.7 −25.6 −12.8 −1.5 7.4 10.0
Dcom −3.3 −10.3 −19.3 −28.1 −34.6 −42.2 −42.7 −32.2 −22.8 −12.8 −1.4 7.0 10.1
Tail, M = 1 −5.7 −6.0 −7.6 −10.6 −17.4 −23.4 −40.8 −12.3 −10.8 −5.3 3.1 1.7 4.6

Tail, M = 2 −5.3 −6.5 −8.5 −10.8 −17.3 −41.0 −45.1 −26.1 −9.9 −3.3 2.7 4.3 6.4
Tail, M = 3 −4.8 −6.0 −8.3 −11.1 −33.0 −41.3 −42.1 −29.7 −15.4 −1.2 5.1 6.1 9.6
Tail, M = 4 −3.0 −5.6 −7.7 −27.2 −34.1 −39.7 −38.5 −27.4 −19.4 −6.0 6.7 8.9 11.2
Tail, M = 5 −1.2 −3.9 −22.7 −28.6 −33.9 −36.5 −34.8 −25.1 −18.5 −10.4 2.2 10.6 12.6
Tail, M = 6 −0.9 −17.3 −23.4 −28.4 −31.3 −33.3 −31.7 −22.5 −17.1 −9.7 −2.6 5.3 12.8

DSSPcont G −5.1 −9.0 −15.2 −11.6 −5.4 −2.8 −0.7 −2.1 −2.7 −0.4 0.8 6.5 4.6
DSSPcont H −6.4 −0.4 5.9 13.1 17.9 22.0 26.3 25.3 21.4 16.5 10.7 6.5 2.4
DSSPcont I −3.4 −6.0 −5.7 −2.5 −0.4 −2.4 0.0 0.3 0.9 0.8 2.0 3.5 2.9
DSSPcont T 2.1 −1.4 −3.1 −9.7 −7.5 −1.5 −1.1 −3.7 −0.3 2.3 4.5 9.3 10.2
DSSPcont E 2.7 5.9 7.3 10.1 12.8 14.9 11.6 4.9 −0.1 −6.9 −12.4 −9.4 −9.3
DSSPcont B 5.5 3.9 3.1 1.4 −0.3 −0.0 3.3 0.4 0.6 −2.8 −1.5 1.9 −5.5
DSSPcont S 8.7 3.3 1.0 −7.5 −14.3 −15.1 −19.5 −14.3 −9.0 −3.4 1.1 0.2 4.2
DSSPcont L −0.3 −1.3 −6.5 −11.4 −21.5 −36.4 −37.0 −27.4 −19.9 −10.7 −1.5 −4.0 1.1
Secondary −5.4 −0.8 5.0 14.5 26.5 39.2 42.9 31.4 22.0 10.5 0.7 3.5 −3.0

Bend (−1, 0, 1) 2.4 1.6 −0.6 −4.5 −10.0 −21.4 −23.2 −20.3 −18.0 −16.2 −13.0 −11.0 −7.0
Bend (−2, 0, 2) 2.6 2.1 0.5 −2.6 −7.0 −11.8 −15.5 −18.6 −17.7 −17.1 −14.7 −12.7 −9.0
loop left −0.9 −1.5 −4.5 −8.0 −14.8 −22.4 −24.6 −24.8 −16.0 −12.1 −9.0 −7.2 −6.7
loop right −8.6 −8.3 −15.4 −20.9 −24.3 −26.4 −34.8 −14.4 −5.7 −0.8 4.7 3.7 5.2
Residue Size −5.2 −0.6 0.4 4.7 7.6 10.4 9.4 8.5 8.1 1.8 1.1 −6.2 −8.0
BB H-bonds energy 7.4 −1.4 −7.3 −15.3 −23.1 −28.5 −35.5 −32.8 −26.7 −14.6 −6.7 0.9 3.8