Table 2.
Examples of misregulated genes. Several genes that were significantly up- or down-regulated at 36 hpf or 48 hpf compared to 1% DMSO controls were selected.
| Reporter ID | Gene Name | 36 hpf Average | 36Standard Deviation | 48 hpf Average | 48 hpf Standard Deviation |
|---|---|---|---|---|---|
| Cell cycle/chromatin/RNA/DNA processing | |||||
| mwgzebrafish#04109 | Biglycan-like protein 3 | 11.585 | 3.942 | 9.412 | 0.904 |
| mwgzebrafish#05567 | DCMP deaminase | 5.986 | 1.124 | 3.403 | 1.000 |
| mwgzebrafish#04079 | Mob1/phocein | 8.900 | 0.726 | 7.296 | 2.019 |
| mwgzebrafish#04110 | Wings apart | 5.195 | 1.279 | 4.688 | 2.163 |
| Cytoskeleton/Cytosolic Transport | |||||
| mwgzebrafish#05549 | E-cadherin binding protein E7 | 10.391 | 3.233 | 5.756 | 1.575 |
| mwgzebrafish#02873 | Keratin 18 | 3.726 | 0.862 | 3.134 | 0.539 |
| mwgzebrafish#06894 | Beta-actin | 0.280 | 0.023 | ||
| Immune Function | |||||
| mwgzebrafish#04096 | CTAGE family, member 5 | 4.665 | 0.864 | 3.875 | 0.448 |
| mwgzebrafish#04064 | Tec-family kinase | 4.956 | 0.705 | 3.487 | 1.024 |
| Metabolism | |||||
| mwgzebrafish#04095 | Angiotensin converting enzyme | 7.947 | 0.739 | 6.020 | 0.822 |
| mwgzebrafish#00919 | Cbr1l protein | 8.035 | 1.971 | 5.063 | 0.540 |
| mwgzebrafish#11641 | Inosine triphosphate pyrophosphatase | 5.625 | 3.587 | 2.715 | 0.156 |
| mwgzebrafish#13913 | Transketolase | 3.112 | 0.280 | 3.040 | 0.350 |
| Protein Processing/Degradation | |||||
| mwgzebrafish#12741 | Cathepsin B | 2.627 | 0.208 | 3.031 | 0.294 |
| mwgzebrafish#04081 | Esrom | 8.228 | 0.201 | 7.710 | 2.500 |
| mwgzebrafish#08710 | Ubiquitin C | 3.708 | 1.163 | 2.859 | 0.759 |
| Signal Transduction | |||||
| mwgzebrafish#07570 | CaM kinase | 18.887 | 4.605 | 6.425 | 1.833 |
| mwgzebrafish#01242 | Neurogenin 1 | 10.825 | 4.724 | 5.662 | 0.877 |
| mwgzebrafish#05534 | RNA-binding region RNP-1 | 8.312 | 0.999 | 5.003 | 0.656 |
| Stress Response | |||||
| mwgzebrafish#01262 | Appb protein | 6.920 | 0.908 | 5.730 | 0.667 |
| mwgzebrafish#11036 | Ferritin | 15.994 | 1.393 | 7.482 | 1.976 |
| mwgzebrafish#05998 | Ferritin subunit 1 | 18.070 | 1.657 | 9.912 | 1.624 |
| mwgzebrafish#00125 | Glutathione S-transferase pi | 11.527 | 1.276 | 9.723 | 0.781 |
| mwgzebrafish#13567 | Major vault protein | 2.865 | 0.421 | 2.977 | 0.711 |
| mwgzebrafish#08871 | Sulfotransferase | 4.616 | 0.953 | 3.931 | 1.624 |
| mwgzebrafish#03954 | Thioredoxin peroxidase | 13.581 | 1.584 | 5.747 | 0.680 |
| mwgzebrafish#00078 | Hsp70 | 6.991 | 1.046 | 2.984 | 0.515 |
| mwgzebrafish#07774 | Glutamate-cysteine ligase, catalytic subunit alpha-tocopherol | 4.926 | 0.677 | ||
| mwgzebrafish#05558 | transfer protein | 4.173 | 1.006 | ||
| mwgzebrafish#00120 | Ferritin heavy chain | 2.716 | 0.112 | 2.750 | 0.359 |