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. 2008 Mar 31;74(11):3471–3480. doi: 10.1128/AEM.02694-07

TABLE 2.

Detection of nitrogenase genes in the environmental isolates using PCR and Southern hybridization

Isolate DNA fragment size(s) (kb)a
nifD/nifH vnfD/vnfG anfD/anfG
AN1 + ND 3.1
ARB2 15 4.4, 5.0 ND
ARB3 12 2.3, 4.3 ND
BR2 1.4 + +
BR3 1.5 + +
BR5 1.4 + +
BR6 1.5 + +
BR7 1.4 + +
BR8 1.5 + +
BR10 + + +
DP6 9 + +
DP7 8 + +
LPF4 + + +
MB4 + 1.7, 4.5 ND
MU1 >10 5.0, 4.5 ND
MU2 >10 5.0, 4.5 ND
MU4 4.4, 1.4 4.9, 3.0, 1.3 6.2, 3.4
MU5 1.4 3.0, 1.3 3.4
MU6 1.5 + ND
MU7 1.4 3.0, 1.3 3.4
MU11 1.4 + +
MU12 1.4 + +
MU13 1.7 + +
NC2 7.1 + +
PB3 >10 2.2 ND
PRM1 7.8 2 >10
a

DNA fragment size(s) in EcoRI digests of genomic DNAs hybridizing to nitrogenase gene probes listed in references 7, 26, and 41. +, products cloned and sequenced using primers listed in references 27, 28, 34, and 54; ND, not detected.