TABLE 1.
Cellobiohydrolase protein sequences used to develop fungcbhI primer set
| Phylum and species | Order | Family | Gene product(s) | GenBank accession no. |
|---|---|---|---|---|
| Basidiomycota | ||||
| Agaricus bisporus | Agaricales | Agaricaceae | 1,4-β-Cellobiohydrolase | CAA90422 |
| Lentinula edodes | Agaricales | Tricholomataceae | Cel7A | AAK95563 |
| Schizophyllum commune | Agaricales | Schizophyllaceae | ScCel1P | AAX55505 |
| Volvariella volvacea | Agaricales | Pluteaceae | CBHI-I, CBHI-II | AAT64006, AAT64007 |
| Athelia rolfsii | Atheliales | Atheliaceae | Cellobiohydrolase | BAC81967 |
| Phanerochaete chrysosporium | Corticiales | Corticiaceae | CBHI, CBHI-II | AAB46373 |
| Polyporus arcularius | Polyporales | Polyporaceae | CBHI | BAF80326 |
| Irpex lacteus | Russulales | Steccherinaceae | Cel2, Cel3, Cex1 | BAA76364, BAA76365, BAD16575 |
| Ascomycota | ||||
| Aspergillus aculeatus | Eurotiales | Tricochomaceae | CBHI | BAA25183 |
| Aspergillus fumigatus | Eurotiales | Tricochomaceae | CelD, 1,4-β-cellobiohydrolase | XP750600, XP751044 |
| Aspergillus nidulans | Eurotiales | Tricochomaceae | 1,4-β-Cellobiohydrolase | AAM54069, AAM54070 |
| Aspergillus niger | Eurotiales | Tricochomaceae | 1,4-β-Cellobiohydrolase | AAF04491, AAF04492 |
| Aspergillus oryzae | Eurotiales | Tricochomaceae | Cellobiohydrolases C and D | BAC07255, BAC07256 |
| Penicillium chrysogenum | Eurotiales | Tricochomaceae | CBHI | AAV65115 |
| Penicillium funiculosum | Eurotiales | Tricochomaceae | Xylanase/cellobiohydrolase | CAC85737 |
| Penicillium janthinellum | Eurotiales | Tricochomaceae | CBHI | CAA41780 |
| Talaromyces emersonii | Eurotiales | Tricochomaceae | CBHI | AAL33603 |
| Thermoascus aurantiacus | Eurotiales | Tricochomaceae | Cellobiohydrolase | AAW27920 |
| Claviceps purpurea | Hypocreales | Clavicipitaceae | 1,4-β-Cellobiohydrolase | CAA68840 |
| Fusarium poae | Hypocreales | Mitosporic | Exoglucanase C | AAX60003 |
| Fusarium venenatum | Hypocreales | Mitosporic | Exoglucanase C | AAX60001 |
| Gibberella zeae | Hypocreales | Nectriaceae | Exoglucanase C | AAX60002 |
| Trichoderma harzianum | Hypocreales | Hypocreaceae | CBHI | AAF36391 |
| Trichoderma viride | Hypocreales | Hypocreaceae | 1,4-β-Cellobiohydrolase, CBHI | CAA37878, BAA36215 |
| Humicola grisea | Mitosporic Ascomycota | Cellulase, 1,4-β-Cellobiosidase, β-glucan cellobiohydrolase | BAA09785, AAD31545, CAA35159 | |
| Alternaria alternata | Pleosporales | Pleosporalaceae | Exoglucanase | AAF05699 |
| Chaetomium thermophilum | Sordariales | Chaetomiaceae | Cbh3, cellobiohydrolase | AAY89412, AAW64926 |
| Neurospora crassa | Sordariales | Sordariaceae | Exocellobiohydrolase | CAA54815 |