Table 1.
Summary of average model and experimental microarray results for influenza hemagglutinin gene that could be placed in separate groups based on lineage
| Sample set | Tile | Resolved base calls | Number of SNPs | Number of N calls | |||||
|---|---|---|---|---|---|---|---|---|---|
| Influenza | Array | Model | Conv | Model | Array | Model only | Array only | Model and array | |
| A Fujian-like lineage (12)* | 770 | 85.4 ± 3.6 | 96.7 ± 0.012 | 9.8 1.3% | 9.2 1.2% | 9.2(0)a | 8.8 | 94.9 | 14.6 |
| A California-like lineage (12)* | 770 | 92.2 ± 7.8 | 95.3 ± 0.013 | 11.9 1.5% | 11.6 1.5% | 10.7(1)a | 15.3 | 38.7 | 21.5 |
| B Yamagata lineage (8)* | 660 | 77.5 ± 3.7 | 86.8 ± 0.011 | 24.5 3.7% | 17.6 2.7% | 12.2(1)a | 26.4 | 87.2 | 61 |
| B Victoria Lineage (4)* | 660 | 47.7 ± 3.9 | 51.4 ± 0.007 | 65.2 9.9% | 39.2 5.9% | 31.2(4)a | 70.2 | 94.2 | 251 |
*Numbers in parenthesis are the number of samples used for analysis.
aNumbers in parenthesis are the number of disagreements with respect to conventional results.