Table 2.
Amino acid polymorphisms of the 5′NR and 3′NR in the Csp of P. falciparum
| Strain | Codon position
|
||
|---|---|---|---|
| 5′NR
|
[repeat] | 3′NR
|
|
| 1111111111 | 33333333334444 | ||
| 47888888888899999999990000000012 | 34466677790000 | ||
| 59012345678901234567890123456747 | 47834701380357 | ||
| M15505 | TDNDNGNNNNGNNNNGDNGREGKDEDKRDGKG | DNAEQKQNLDPQDE | |
| M83173 | I............................... | .............. | |
| M83149 | I----------..................... | .........N.E.. | |
| M83150 | I----------..................... | ...TE....GSE.. | |
| M83156 | I----------..................... | ..D....Y...... | |
| M83158 | I----------..................... | .........N.E.. | |
| M83161 | I----------..................... | ...KET..IG.EE. | |
| M83163 | I----------..................... | ...TE....GSE.. | |
| M83164 | I----------..................... | ...TE....GSE.. | |
| M83165 | I----------..................... | .........N.E.. | |
| M83166 | I----------..................... | .........N.E.. | |
| M83167 | I----------..................... | ..D....Y...... | |
| M83168 | I----------..................... | .........N.E.. | |
| M83169 | I----------..................... | .........N.E.. | |
| M83170 | I----------..................... | .........N.E.. | |
| M83174 | I----------..................... | ..D....Y...... | |
| M19752 | .----------.......N...........T. | .........N.E.. | |
| M83172 | I----------..................... | .............. | |
| K02194 | .----------..................... | ......K.IN.E.. | |
| M57499 | .----------..................... | .........N.E.. | |
| U20969 | .----------........G...........A | N........GSE.. | |
| M83886 | .-----------------------------.A | .S.KEN...N.E.A | |
| M22982 | .-----------------------------.A | .S.KEN...N.E.A | |
| X15363 | .-----------------------------.A | .S.KEN...N.E.A | |
| M57498 | .-----------------------------.A | ......K..N.E.A | |
Dots (.) indicate identity with M15505, dashes (-) represent gaps.