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. 2008 Mar 28;95(1):296–311. doi: 10.1529/biophysj.107.120501

FIGURE 8.

FIGURE 8

(a) Eigenvalue versus eigenvector index (10 nm2) and (b) cumulative eigenvalues (%) derived from principal components analysis of trajectories of all atoms for the first 10 eigenvectors of model 1 (black), model 3 (dark gray), and model 4 (light gray) simulations. The concerted motion specified by first five eigenvectors can account for ∼60% of the overall motion.