TABLE 2.
Segments | Model 145-mer | Model 245-mer (EBS)* | Model 345-mer (+ BSU6039) | Model 493-mer |
---|---|---|---|---|
Tetrads | ||||
Quadruplex 1 (A) | 1.44 | 1.32 | 1.30 | 1.18 |
Tetrad 1 | 1.62 | 1.51 | 1.24 | 1.48 |
Tetrad 2 | 1.61 | 1.34 | 1.53 | 1.12 |
Tetrad 3 | 1.11 | 1.13 | 1.13 | 0.96 |
Quadruplex 2 (B) | 1.18 | 1.11 | 1.09 | 1.08 |
Tetrad 4 | 1.41 | 1.57 | 1.22 | 1.10 |
Tetrad 5 | 1.06 | 0.86 | 1.06 | 0.79 |
Tetrad 6 | 1.15 | 0.91 | 1.01 | 1.37 |
Quadruplex 3 (C) | – | – | – | 0.98 |
Tetrad 7 | – | – | – | 1.14 |
Tetrad 8 | – | – | – | 0.94 |
Tetrad 9 | – | – | – | 0.88 |
Quadruplex 4 (D) | – | – | – | 1.16 |
Tetrad 10 | – | – | – | 1.28 |
Tetrad 11 | – | – | – | 0.96 |
Tetrad 12 | – | – | – | 1.24 |
Individual loops | ||||
Quadruplex 1 | ||||
Loop LA1 | 1.34 | 1.55 | 1.51 | 1.51 |
Loop LA2 | 1.39 | 0.84 | 1.28 | 1.13 |
Loop LA3 | 1.57 | 1.53 | 1.25 | 1.67 |
TTA Linker Loop 1 | 1.36 | 3.91 | 1.74 | 1.11 |
Quadruplex 2 | ||||
Loop LB1 | 1.39 | 1.20 | 1.19 | 1.43 |
Loop LB2 | 1.10 | 1.65 | 1.37 | 1.66 |
Loop LB3 | 1.30 | 1.49 | 1.12 | 1.47 |
TTA Linker Loop 2 | – | – | – | 0.95 |
Quadruplex 3 | ||||
Loop LC1 | – | – | – | 1.81 |
Loop LC2 | – | – | – | 1.23 |
Loop LC3 | – | – | – | 1.15 |
TTA Linker Loop 3 | – | – | – | 1.10 |
Quadruplex 4 | – | – | – | 0.94 |
Loop LD1 | – | – | – | 1.33 |
Loop LD2 | – | – | – | 0.74 |
Empty binding site.