Table 1.
Conservation of U12 and U2 intron positions in orthologous human and Arabidopsis genesa
U2 intron positions | U12 intron positions | PFisher | |||
Shared | Variable | Shared | Variable | ||
#conserved positions (U2–U12 mixed cases removed) | 115 | 1371 | 20 | 115 | 0.008 |
#conserved positions, U2–U12 mixed cases are counted as variable introns | 115 | 1391 | 20 | 135 | 0.003 |
aTo eliminate potential artifacts caused by misalignment, all positions containing a deletion or insertion in the alignment within 5 adjacent position both upstream and downstream were discarded from calculation [16]; the results changed minimally when a stricter criterion was applied by eliminating 10 adjacent positions (data not shown).