Table 2. Polymorphic sequence variations in exon ORF15 of RPGR found in X-linked retinitis pigmentosa patients.
Patient ID | Deletions or duplications found in exon ORF15 (1) | Deletions or duplications found in exon ORF15 (2) | Nucleotide substitutions found in exon ORF15 (1) | Nucleotide substitutions found in exon ORF15 (2) | Protein change resulting from nucleotide substitutions (1)/(2) |
24731 | g.ORF15+1060_1080dup21 | c.2813_2833dup21 | g.ORF15+1643C>T | c.3396C>T | p.N547N / p.N1132N |
24731 | - | - | g.ORF15+1677G>A | c.3430G>A | p.V559I / p.V1144I |
24747 | - | - | g.ORF15+1643C>T | c.3396C>T | p.N547N / p.N1132N |
24747 | - | - | g.ORF15+1677G>A | c.3430G>A | p.V559I / p.V1144I |
2678 | - | - | g.ORF15+1813A>C | c.3566A>C | 3'UTR |
2814 | - | - | g.ORF15+1643C>T | c.3396C>T | p.N547N / p.N1132N |
2814 | - | - | g.ORF15+1677G>A | c.3430G>A | p.V559I / p.V1144I |
2814 | - | - | g.ORF15+1813A>C | c.3566A>C | 3'UTR |
2865 | g.ORF15+1307_1318delAGTGGAAGGGGA | c.3060_3071del12 | - | - | - |
3044 | g.ORF15+914_916delGGA | c.2667_2669del3 | g.ORF15+588G>A | c.2341G>A | p.A196T / p.A781T |
25085 | g.ORF15+1307_1318delAGTGGAAGGGGA | c.3060_3071del12 | - | - | - |
The sequence alterations are either presented in approved nomenclature according to Human Genome Variation Society (2) or as recommended by Bader et al., 2003 [9] and Sharon et al., 2003 [15] (1) (BC043348 and NM_001034853 were used as reference sequence for, respectively, RP2 and RPGR mutation analysis).