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. Author manuscript; available in PMC: 2008 Jun 12.
Published in final edited form as: Curr Drug Metab. 2008 Jun;9(5):363–373. doi: 10.2174/138920008784746346

Table 5.

Predictions with the original CYP2B6 pharmacophore [5].

Molecule Observed Km (µM) Rigid Fit predicted Km (µM) Log residual Shape Mapping
Nevirapine 834 129.3 −0.81 y
(R)- methadone 41 5.3 −0.89  
(S)- methadone 21 32.7 0.19  
N-methyl,N-propargyl-2-phenylethylamine 290 7762.5 1.43  
(+)-fenchone 180 295.9 0.22  
Endosulfan Alpha 16.2 30 0.27  
Prasugrel 2.3 31.2 1.13  
NNK 33 30.7 −0.03 y
(S)-Nicotine 820 150.8 −0.73 y
Sertraline 30.7 50.2 0.21 y
Meperidine 356 6.4 −1.7 y
Ethylbenzene 219 9045.5 1.61  
Verbenone 91 290.84 0.50  
Efavirenz 12.4 80.4 0.81  
Carbamazepine 420 102.4 −0.61 y
Carbaryl 11 45.1 0.61 y
(S)-Ketamine 44.4 35.8 −0.09 y
(R)-Ketamine 74.1 34.2 −0.33 y
LAAM 17.7 1.7 −1.02
Nor-LAAM 26 56.9 0.34  
S-mephobarbital 264 167.5 −0.20  
Selegiline 25 28.3 0.05 y
(S)-ifosfamide 900 1.2 −2.87 y
(R)-ifosfamide 500 0.4 −3.10 y
Cyclophosphamide 1400 36.2 −1.59 y
(R)-fluoxetine 125 81.3 −0.19 y
(S)-fluoxetine 546 83.4 −0.82 y
Propofol 10 561.9 1.75 y

y = Yes