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. 2008 May 30;82(6):1231–1240. doi: 10.1016/j.ajhg.2008.04.006

Table 2.

SNPs from Pooled GWAS Selected to be Tested in Additional Samples

SNP Odds Ratio 95% C.I. Z Score −log10 P FPRP with π = 0.0005 Chr Position Nearest Gene(s)
rs4140564 3.34 1.89 5.92 4.312 5.09 0.124 1 184991626 PLA2G4A/PTGS2
rs1539414 1.67 1.19 2.33 4.170 4.82 0.288 1 194475163 DENND1B
rs12041748 2.39 1.59 3.59 4.654 5.79 0.104 1 235550588 RYR2
rs7581129 0.41 0.25 0.66 4.167 4.81 0.498 2 4160033 TSSC1
rs1207421 2.86 1.63 5.02 4.168 4.81 0.460 2 205976100 PARD3B
rs749052 0.28 0.17 0.46 4.305 5.08 0.004 2 232622115 NPPC
rs4955917 1.58 1.25 1.99 4.017 4.53 0.316 3 55021142 CACNA2D3/WNT5A
rs7628387 1.98 1.30 2.78 3.745 4.05 0.227 3 178046256 TBL1XR1
rs1961397 0.50 0.35 0.72 4.352 5.17 0.416 3 189111629 BCL6
rs1990525 3.76 1.93 7.29 4.282 5.03 0.287 4 15097292 C1QTNF7
rs7774801 5.28 2.60 10.89 4.048 4.59 0.029 6 22248420 PRL
rs1324089 2.37 1.49 3.78 4.095 4.68 0.089 6 85022001 C6orf84
rs7757372 1.83 1.18 2.83 4.094 4.67 0.203 6 143972097 PHACTR2
rs2057999 1.81 1.31 2.48 3.986 4.47 0.501 7 21147012 SP4
rs7005969 2.70 1.81 4.04 4.169 4.82 0.213 8 2926103 CSMD1
rs10504460 3.53 2.06 6.05 4.738 5.97 0.018 8 70886578 SLCO5A1
rs2453998 3.85 2.11 7.05 4.826 6.16 0.282 8 104158794 ATP6V1C1
rs2274699 2.47 1.61 3.79 4.182 4.84 0.114 9 71579586 TMEM2
rs7026263 1.77 1.20 2.63 4.114 4.71 0.099 9 133711962 VAV2
rs10823602 3.40 2.02 5.71 4.348 5.16 0.310 10 72145774 ADAMTS14
rs4531428 2.44 1.66 3.60 3.908 4.33 0.028 11 100917249 TRPC6
rs975162 0.50 0.36 0.68 4.785 6.07 0.039 12 125567785 PGBD3P3
rs3818287 1.94 1.35 2.78 4.196 4.87 0.203 14 102500300 CDC42BPB
rs751837 0.42 0.26 0.67 3.913 4.34 0.496 14 102554578 CDC42BPB
rs2896463 0.31 0.18 0.56 4.52 5.51 0.233 14 102560645 CDC42BPB
rs333603 0.69 0.53 0.84 4.008 4.51 0.415 15 64126454 MEGF11
rs7172123 2.59 1.64 4.09 4.552 5.58 0.389 15 66813101 CORO2B
rs6096822 2.83 1.73 4.61 3.957 4.42 0.433 20 35970860 C20orf102