Table 1. Limited cycle and real time PCR primers.
Limited cycle PCR primers | |||
Gene |
Sense primer 5′-3′ |
Antisense primer 5′-3′ |
Probe 5′-3′ |
VEGF |
CTGCTCTACCTCCACCATGC |
CTGCATTCACATTTGTTGTGC |
|
CHL-1 |
TCTGTCACCTTTTGCAGTGG |
GTTGCCGATTCTGAA AGAGC |
|
Cox2 |
AACAGGAGCATCCTGAATGG |
ATTTCATCTGCCTGCTCTGG |
|
RTP801 |
TCTTAGCAGTTCTCGCTGACC |
TGGCACACAAGTGTTCATCC |
|
BMP-2 |
CAAGATGAACACAGCTGG |
TTTGCTGTACTAGCGACACC |
|
BMP-4 |
GGCTGTCAAGAATCATGG |
GCTCAGGATACTCAAGAC |
|
18S |
GTGGAGCGATTTGTCTGGTT |
CGCTGAGCCAGTCAGTGTAG |
|
Real time PCR primers | |||
Gene |
Sense primer 5′-3′ |
Antisense primer 5′-3′ |
Probe 5′-3′ |
VEGF |
GTGCCCACTGAGGAGTCCA |
GTGCTGGCCTTGGTGAGGT |
CATCACCATGCAGATTATGCGGATCAA |
Cox2 |
AGCCCTTCCTCCTGTGCCT |
CAGGAAGCTGCTTTTTACC |
TGATTGCCCGACTCCCTTG |
CHL-1 | CGTAGCTGAAGGGCTCTTT | ACACGTTTCCCTCCGAACA | AAATCGGCAACCCAATCAAT |
Limited cycle PCR was performed using primers, designed using Primer3 software [11]. For real-time, PCR probes were labeled with 5′-FAM and 3′-TAMRA as quencher with the exception of the ribosomal probe, which was labeled with 5′-VIC to facilitate multiplexing.