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. Author manuscript; available in PMC: 2009 May 9.
Published in final edited form as: J Mol Biol. 2008 Mar 4;378(4):954–968. doi: 10.1016/j.jmb.2008.02.063

Table 1.

Summary of cadherin domain structures included in this study

Family Protein Domain PDB ID Range Resolution (Ǻ) Notes
Type I E-cadherin EC1 1FF516 1–99 2.93 non-swapped; non-native extra residue§ (M) at N-terminus
EC2 1FF5 105–212 2.93
Type I E-cadherin EC1 1Q1P21 2–99 3.20 swapped; N-terminal residue disordered
EC2 1Q1P 105–212 3.20
Type I E-cadherin EC1 1EDH15 3–99 2.00 non-swapped; N-terminal 2 residues disordered
EC2 1EDH 105–212 2.00
Type I E-cadherin EC1 2O7223 1–99 2.00 swapped
EC2 2O72 105–212 2.00
Type I E-cadherin EC1 1O6S19 1–99 1.80 in complex with internalin; non-native extra 4 residues (GPLG) at N-terminus and D1S mutation
Type I E-cadherin EC1 1SUH13 1–99 NMR monomeric
Type I C-cadherin EC1 1L3W17 1–99 3.08 swapped
EC2 1L3W 105–212 3.08
EC3 1L3W 218–324 3.08
EC4 1L3W 329–431 3.08
EC5 1L3W 437–540 3.08
Type I N-cadherin EC1 1NCI14 2–99 2.10 swapped; non-native extra 2 residues (GS) at N-terminus; D27G mutation
Type I N-cadherin EC1 1NCG14 1–99 2.10 swapped; D27G mutation
Type I N-cadherin EC1 1NCH14 1–99 2.10 swapped; non-native extra 2 residues (GS) at N-terminus of one chain; D27G mutation
Type I N-cadherin EC1 1NCJ27 2–99 3.40 monomeric; N-terminal residue disordered
EC2 1NCJ 105–214 3.40
Type I (non-swapping) T-cadherin EC1 ---* 1–98 1.10 non-swapped; A1S mutation
Type I (non-swapping) T-cadherin EC1 ---* 1–98 2.90 non-swapped; A1S mutation
EC2 104–216 2.90
Type II mn-cadherin EC1 1ZVN22 1–97 2.16 swapped; non-native extra residue (G) inserted between the first two N-terminal residues
Type II cadherin-11 EC1 2A4C22 1–97 2.90 swapped; non-native extra residue (S) at N-terminus
Type II cadherin-11 EC1 2A4E22 1–97 3.20 swapped; non-native extra residue (S) at N-terminus
EC2 2A4E 102–206 3.20
Type II cadherin-8 EC1 1ZXK22 1–97 2.00 swapped; G1S mutation
Type II cadherin-8 EC1 2A6222 1–97 4.50 swapped; G1S mutation
EC2 2A62 103–206 4.50
EC3 2A62 212–322 4.50
Protocadherin protocadherin-α4 EC1 1WUZ25 1–98 NMR monomeric
Protocadherin protocadherin-α14 EC1 1WYJ** 9–106 NMR monomeric; non-native extra 7 residues (GSSGSSG) at N-terminus
Protocadherin protocadherin-7 EC3 2YST** 11–112 NMR monomeric; non-native extra 6 residues (SSGSSG) and native linker sequence (NDN) at N- terminus
Type I N-cadherin prodomain 1OP420 33–124 NMR monomeric
Desmoglein desmoglein-2 EC1 2YQG** 11–111 NMR monomeric; non-native extra 8 residues (GSSGSSGQ) and native protease site (KR) at N-terminus
§

Non-native residues include residues seen in the crystal structure that are not found in the native protein sequence.

*

unpublished

**

to be published; coordinates available from the RCSB Protein Data Bank (http://www.rcsb.org/pdb/)