Table 1.
Family | Protein | Domain | PDB ID | Range | Resolution (Ǻ) | Notes |
---|---|---|---|---|---|---|
Type I | E-cadherin | EC1 | 1FF516 | 1–99 | 2.93 | non-swapped; non-native extra residue§ (M) at N-terminus |
EC2 | 1FF5 | 105–212 | 2.93 | |||
Type I | E-cadherin | EC1 | 1Q1P21 | 2–99 | 3.20 | swapped; N-terminal residue disordered |
EC2 | 1Q1P | 105–212 | 3.20 | |||
Type I | E-cadherin | EC1 | 1EDH15 | 3–99 | 2.00 | non-swapped; N-terminal 2 residues disordered |
EC2 | 1EDH | 105–212 | 2.00 | |||
Type I | E-cadherin | EC1 | 2O7223 | 1–99 | 2.00 | swapped |
EC2 | 2O72 | 105–212 | 2.00 | |||
Type I | E-cadherin | EC1 | 1O6S19 | 1–99 | 1.80 | in complex with internalin; non-native extra 4 residues (GPLG) at N-terminus and D1S mutation |
Type I | E-cadherin | EC1 | 1SUH13 | 1–99 | NMR | monomeric |
Type I | C-cadherin | EC1 | 1L3W17 | 1–99 | 3.08 | swapped |
EC2 | 1L3W | 105–212 | 3.08 | |||
EC3 | 1L3W | 218–324 | 3.08 | |||
EC4 | 1L3W | 329–431 | 3.08 | |||
EC5 | 1L3W | 437–540 | 3.08 | |||
Type I | N-cadherin | EC1 | 1NCI14 | 2–99 | 2.10 | swapped; non-native extra 2 residues (GS) at N-terminus; D27G mutation |
Type I | N-cadherin | EC1 | 1NCG14 | 1–99 | 2.10 | swapped; D27G mutation |
Type I | N-cadherin | EC1 | 1NCH14 | 1–99 | 2.10 | swapped; non-native extra 2 residues (GS) at N-terminus of one chain; D27G mutation |
Type I | N-cadherin | EC1 | 1NCJ27 | 2–99 | 3.40 | monomeric; N-terminal residue disordered |
EC2 | 1NCJ | 105–214 | 3.40 | |||
Type I (non-swapping) | T-cadherin | EC1 | ---* | 1–98 | 1.10 | non-swapped; A1S mutation |
Type I (non-swapping) | T-cadherin | EC1 | ---* | 1–98 | 2.90 | non-swapped; A1S mutation |
EC2 | 104–216 | 2.90 | ||||
Type II | mn-cadherin | EC1 | 1ZVN22 | 1–97 | 2.16 | swapped; non-native extra residue (G) inserted between the first two N-terminal residues |
Type II | cadherin-11 | EC1 | 2A4C22 | 1–97 | 2.90 | swapped; non-native extra residue (S) at N-terminus |
Type II | cadherin-11 | EC1 | 2A4E22 | 1–97 | 3.20 | swapped; non-native extra residue (S) at N-terminus |
EC2 | 2A4E | 102–206 | 3.20 | |||
Type II | cadherin-8 | EC1 | 1ZXK22 | 1–97 | 2.00 | swapped; G1S mutation |
Type II | cadherin-8 | EC1 | 2A6222 | 1–97 | 4.50 | swapped; G1S mutation |
EC2 | 2A62 | 103–206 | 4.50 | |||
EC3 | 2A62 | 212–322 | 4.50 | |||
Protocadherin | protocadherin-α4 | EC1 | 1WUZ25 | 1–98 | NMR | monomeric |
Protocadherin | protocadherin-α14 | EC1 | 1WYJ** | 9–106 | NMR | monomeric; non-native extra 7 residues (GSSGSSG) at N-terminus |
Protocadherin | protocadherin-7 | EC3 | 2YST** | 11–112 | NMR | monomeric; non-native extra 6 residues (SSGSSG) and native linker sequence (NDN) at N- terminus |
Type I | N-cadherin | prodomain | 1OP420 | 33–124 | NMR | monomeric |
Desmoglein | desmoglein-2 | EC1 | 2YQG** | 11–111 | NMR | monomeric; non-native extra 8 residues (GSSGSSGQ) and native protease site (KR) at N-terminus |
Non-native residues include residues seen in the crystal structure that are not found in the native protein sequence.
unpublished
to be published; coordinates available from the RCSB Protein Data Bank (http://www.rcsb.org/pdb/)