Table 3.
Exon | Probe length (nt) | Ligation site sequence | Mutations in area of ligation site sequence* |
---|---|---|---|
1,5′ UTR | 154 | 5′-GAGCAAAT-TTGGGGCC-3′ | N/A |
1,5′ UTR | 238 | 5′-AAAGGGTT-GAGCGGCA-3′ | |
2 | 198 | 5′-TTGGTATA-TGTCTGAC-3′ | (5) |
3 | 136 | 5′-CTGCTAGT-GTTGCCAA-3′ | (3) |
3 | 220 | 5′-TTCAAAGA-AAAATCCT-3′ | |
4 | 247 | 5′-AGAATCAT-AGCTTCCT-3′ | 444delA, African; 451del8, Chinese; (6) |
5 | 346 | 5′-AAATAAGT-ATTGGACA-3′ | Q179K, Hispanic (7) |
6a | 274 | 5′-GAGTTGTT-ACAGGCGT-3′ | L218X, Pakistani (4) |
6b | 301 | 5′-ATTTTCAA-TCATTTCT-3′ | 935delA, Hispanic; 936delTA, Hispanic (3) |
7 | 337 | 5′-ACTTCAAT-AGCTCAGC-3′ | S307N, Turkish (9) |
8, IVS 8 | 364 | 5′-TTTCTAGA-TTAAGAAG-3′ | N/A |
9, IVS 8 | 391 | 5′-TCCATCAC-ACTGGTAG-3′ | N/A |
10 | 463 | 5′-TCCACTGT-GCTTAATT-3′ | H484Y, Hispanic; S485C, Chinese-Caucasian (5) |
11 | 418 | 5′-CAGAGAAA-GACAATAT-3′ | K536X, Iranian; 1742delAC, Japanese (5) |
12, IVS 12 | 292 | 5′-TGCATTTT-ACCTCTTG-3′ | N/A |
13 | 142 | 5′-CAGATTCT-GAGCAGGG-3′ | (1) |
14a | 160 | 5′-GTATGTGT-TCCATGTA-3′ | (3) |
14b | 178 | 5′-CTGCTTCT-TTGGTTGT-3′ | 2766del8, Tunisian (1) |
15 | 204 | 5′-GCTTGCTA-TGGGATTC-3′ | (1) |
16, IVS 16 | 229 | 5′-GATGTAAT-AGCTGTCT-3′ | N/A |
17a | 256 | 5′-TGCAACAA-AGATGTAG-3′ | 3171delC, Hispanic; 3173delAC, Turkish; F1016S, Hispanic (5) |
17b | 283 | 5′-CAGTATGT-AAATTCAG-3′ | H1085R, Japanese (4) |
18 | 310 | 5′-CCATGAAT-ATCATGAG-3′ | M1137R, Hispanic (6) |
19 | 353 | 5′-TCTGTGTA-TTTTGCTG-3′ | 3791delC, African-American (2) |
20 | 382 | 5′-CTTGGGAT-TCAATAAC-3′ | 3960delA, Hispanic (2) |
21 | 409 | 5′-TGCAACTT-TCCATATT-3′ | W1316X, African-American (2) |
22 | 436 | 5′-GAACAGTT-TCCTGGGA-3′ | No mutations |
23 | 148 | 5′-CCAGCATT-GCTTCTAT-3′ | M1407T, Turkish; E1409K, Hispanic (2) |
24 | 190 | 5′-ATCCAGAA-ACTGCTGA-3′ | No mutations |
24 | 172 | 5′-CTCCTCTT-TCAGAGCA-3′ |
UTR, untranslated region; IVS, intervening sequence; N/A, not applicable, probes not in coding region; No mutations, no reported mutations are present in the area of the ligation site sequence, regardless of ethnicity.
Without parentheses, non-Caucasian mutations. In parentheses, total number of mutations in area of ligation site sequence.