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. 2008 Jul 11;4(7):e1000102. doi: 10.1371/journal.ppat.1000102

Figure 1. Phylogenetic relationships of the hemagglutinin (HA) gene of the influenza (H5N1) viruses.

Figure 1

Sequences (nucleotides 77 to 1723) were analyzed by using the neighbor-joining method with 500 bootstraps. Phylogenetic tree was rooted to the HA gene of A/Goose/Guangdong/1/96 (H5N1) virus. H5N1 viruses used in this study are shown in red. Abbreviations: BHGs, bar-headed goose; Ck, chicken; Dk, duck; Gs, goose; HCr, house crow; MDk, muscovy duck; Qa, quail; WS, whooper swan.