Table 4. MLST-profiles of strains of mixed ancestry (heterozygous and mosaic genotypes) and alleles unique to Alto Douro.
strain | region | MON | Lm2TG | TubCA | Lm4TA | Li 41–56 | Li 46–67 | Li 22–35 | Li 23–41 | Li 45–24 | Li 71–33 | Li 71–5/2 | Li 71–7 | CS20 | LIST7031 | LIST7039 |
[bp] | [bp] | [bp] | [bp] | [bp] | [bp] | [bp] | [bp] | [bp] | [bp] | [bp] | [bp] | [bp] | [bp] | |||
INF-32 | Catalonia | 77 | 138/144 | 80/86 | 79 | 90/92 | 80 | 94/114 | 85 | 105/113 | 105 | 110 | 100 | 83/85 | 111 | 207/215 |
ES9(III) | Majorca | 24 | 142/150 | 80 | 75/77 | 90/92 | 78/80 | 90/106 | 85 | 103/109 | 105 | 106/110 | 98/100 | 83/89 | 111 | 207/215 |
ES10(III) | Majorca | 24 | 142/150 | 80 | 75/77 | 90/92 | 78/80 | 90/106 | 85 | 103/109 | 105 | 106/110 | 98/100 | 83/89 | 111 | 207/215 |
PT2(I)a | Algarve | 1 | 142/148 | 80 | 79 | 90/94 | 80/82 | 100/124 | 85 | 105/113 | 105/111 | 108 | 90/100 | 83/87 | 111 | 207/213 |
ES16(I) | Majorca | 1 | 142 | 80 | 75 | 90 | 80 | 94 | 85 | 103 | 105 | 108 | 98 | 83 | 111 | 207 |
PT8(II) | Alto Douro | 1 | 116/140 | 80 | 75 | 90 | 80 | 94/118b | 83 | 105 | 105 | 110 | 100 | 83 | 109/111 | 207 |
PT8 (I) | Alto Douro | 1 | 126 | 80 | 81 | 90/94 | 80 | 94 | 85 | 119b | 105 | 110 | 100 | 83 | 109 | 207 |
PT7(I) a | Alto Douro | 1 | 138 | 80 | 75 | 90 | 74/80 | 118 b | 67 b/85 | 105 | 105 | 112 | 100 | 83 | 109/111 | 207/211 |
PT13(II) | Alto Douro | 1 | 138 | 80 | nd | 90 | 74/80 | 118 b | 67b/85 | 105 | 105 | 110 | 100 | 83 | 111 | 207/211 |
PT6(I) a | Alto Douro | 1 | 138 | 80 | 75 | 90 | 80 | 118 b | 85 | 105 | 105 | 110 | 100 | 83 | 109 | 207 |
Phlebotomus isolates;
Alleles unique for strains from Alto Douro; bold: alleles found exclusively in non-MON-1 strains, italics: alleles found exclusively in MON-1 strains Several alleles are found in both groups-MON-1 and non-MON-1, sometimes with similar frequencies, in other cases the frequency is different in MON-1 and non-MON-1, up to the case that some alleles are dominating in one of those groups-see Table 5. nd-not defined.