Characterization of the E. histolytica N-glycans by in
vivo labeling and glycosylhydrolase digestions. E. histolytica
N-glycans, which were prepared as in
Fig. 2, were treated with
glycosylhydrolases, and digestion products were identified according to
retention times (r.t.) of known standards (e.g.
Man3GlcNAc2). For isomers H6.2, H6.5, and H7.1, the
dashed line enclosing the Manα1,6-arm indicates what
corresponds to the residual fragment 11.5, which was fully characterized in a
separate [U-14C]Glc-labeling experiment. Note that jack bean
α-mannosidase (JBAM) removes an exposed Manα1,3- (as in
isomer H4.3), but it does not remove the Manα1,6-unless the
Manα1,3-arm is digested first. Hence, isomer H4.2 becomes susceptible to
jack beanα-mannosidase digestion only after removal of Galα1,2- by
α-galactosidase. The mode of action of jack bean α-mannosidase
(37) supports our assumption
that the different sensitivities of H4.2 and H4.3 are due to accessibility of
α-linked Man residues. In accordance with this, the underlying
structures of other isomers were inferred as well. ASAM, A. saitoi
α1,2-mannosidase.