NMR data on secondary structure and tertiary folding of KChIP4a.
A, sequence, secondary structure, and schematic representation of NMR
data of KChIP4a. The KIS domain is indicated by a hatched bar.
Secondary structure elements determined by NMR and for the crystal structure
of KChIP1 (5) are indicated by
black and gray symbols, respectively. Cylinders
represent helices (H1-H10), arrows are short β-strands in the
metal-binding loops of the EF-hands. Residues whose backbone amide group was
not assigned are underlined; residues not protected from solvent
exchange on the ms-s timescale are highlighted in gray. Cα
chemical shift index (csi)
(38) (values were corrected
for 2H isotope effects
(48,
49)) identifies secondary
structures of KChIP4a: Upright bars reflect a csi value of +1
(typical forα-helices), bars with downward orientation
represent a csi value of -1 (typical for β-strands), small black
rectangles represent a csi value of 0 (chemical shifts similar to random
coil values). Diamonds summarize a 1H/2H
exchange experiment: open and filled symbols correspond to
residues with amide protons still present after 90 min and 28 h of exchange
time in 100% 2H2O, respectively. B, analysis of
1H-15N residual dipolar couplings (RDCs) of KChIP4a.
Correlation between observed 1H-15N RDCs and couplings
predicted for a structural model of the KChIP4a core based on the 2.3 Å
x-ray structure of isolated KChIP1
(5) (PDB entry 1S1E). The
analysis was done with the PALES program
(26). Alignment tensor
relative to the model: DaNH = 6.4 Hz and rhombicity
r = 0.35.