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. 2008 May 17;36(11):e65. doi: 10.1093/nar/gkn299

Table 1.

Oligonucleotide sequences for IL-8 and S100A8

Designation Sequence (5′ to 3′) 5′-label 3′-label
IL-8 HPL0a,b GAG GGT TGC TCA GCC CTC TTC AAA AAC TTC TCC ACA ACC CTC Biotin Fluorescein
IL-8 HPL1a,b GAG GGT TGC TCA GCC CTC TTC AAA AAC TTC TCC ACA ACC CTC BiotinTEG Fluorescein
IL-8 HPL2a,b TTT TTT TTT GAG GGT TGC TCA GCC CTC TTC AAA AAC TTC TCC ACA ACC CTC Biotin Fluorescein
IL-8 HPL3a,b TTT TTT TTT GAG GGT TGC TCA GCC CTC TTC AAA AAC TTC TCC ACA ACC CTC BiotinTEG Fluorescein
IL-8 CPc TTT TTT TAT GAA TTC TCA GCC CTC Biotin
IL-8 DPc TTC AAA AAC TTC TCC ACA ACC CTC Fluorescein
IL-8 HPa,b GAG GGT TGC TCA GCC CTC TTC AAA AAC TTC TCC ACA ACC CTC Biotin Fluorescein
S100A8 HPa,b GTG TCC TCT TTG AAC CAG ACG TCT GCA CCC TTT TTC CTG ATA TAC TGA GGA CAC Biotin Fluorescein

aHairpin probe design was calculated by MFold free web server (27,28).

bThe target recognition sequences are listed in italic font. The stem sections of the hairpins are underlined.

cIL-8 CP is the capture probe with biotin label in dual probes detection. IL-8 DP is the detect probe with fluorescein label in dual probes detection.