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. 2008 Jul;72(4):303–310.

Table III.

Posterior estimates of true pig-level prevalence (%) and herd-level prevalence (%) of Toxoplasma gondii in Ontario 2001, 2003, and 2004 and for coefficients of random effect logistic regression model

Node Mean 2.5 pa Median 97.5 pa Prior
Tests
 Test sensitivity 85.28 73.73 85.79 93.94 Beta (44.5, 6.6)
 Test specificity 99.88 99.75 99.89 99.96 Beta (159.1, 4.2)
Logistic regression model (LRM)
 Intercept −6.22 −7.17 −6.21 −5.35 N (0,1)
 Presence of cats 0.23 −0.85 0.24 1.26 N (0,1)
 Year 2003 −2.00 −3.36 −1.98 −0.75 N (0,1)
 Year 2004 −1.47 −2.78 −1.45 −0.26 N (0,1)
 Herd (random) 2.15e 1.68e 2.13e 2.73e N [0, Gamma(1,25)]d
Prevalence
 Pig true prevalence in 2001 1.69 1.22 1.67 2.25 (LRM)
 Pig true prevalence in 2003 0.19 0.04 0.17 0.45 (LRM)
 Pig true prevalence in 2004 0.33 0.10 0.31 0.69 (LRM)
 Herdb prevalence in 2001 11.28 7.37 11.58 16.84 (LRM)
 Herdb prevalence in 2003 0.52 0.00 0.00 2.50 (LRM)
 Herdb prevalence in 2004 1.54 0.00 1.25 5.00 (LRM)
 Herdc prevalence in 2001 5.84 3.16 6.32 8.42 (LRM)
 Herdc prevalence in 2003 0.05 0.00 0.00 1.25 (LRM)
 Herdc prevalence in 2004 0.33 0.00 0.00 1.25 (LRM)

N — Normal distribution; LRM — logistic regression model.

a

p — percentile.

b

Based on ≥ 1 as a herd cut-off.

c

Based on ≥ 2 as a herd cut-off.

d

Specified in a form as required by WinBugs (as precision, not as standard deviation).

e

Specified as standard deviation.