Table 2.
Top 70 up-regulated genes
| No. | Gene symbol | False discovery rate | Fold difference | Description |
| 1 | SCAM-1 | < 1e-07 | 22.68 | vinexin beta (SH3-containing adaptor molecule-1) |
| 2 | SNTB1 | < 1e-07 | 22.04 | syntrophin, beta 1 (dystrophin-associated protein A1, 59 kDa, basic component 1) |
| 3 | DMWD | < 1e-07 | 21.75 | dystrophia myotonica-containing WD repeat motif |
| 4 | NPFF | < 1e-07 | 20.72 | neuropeptide FF-amide peptide precursor |
| 5 | FXYD3 | < 1e-07 | 6.97 | FXYD domain containing ion transport regulator 3 |
| 6 | ATP6V0B | < 1e-07 | 5.77 | ATPase, H+ transporting, lysosomal 21 kDa, V0 subunit c" |
| 7 | PPIB | < 1e-07 | 4.64 | peptidylprolyl isomerase B (cyclophilin B) |
| 8 | HIST1H4C | < 1e-07 | 3.81 | histone 1, H4c |
| 9 | PHB | 9.40e-06 | 7.07 | prohibitin |
| 10 | NME1 | 9.40e-06 | 5.00 | non-metastatic cells 1, protein (NM23A) expressed in |
| 11 | NDUFA9 | 9.40e-06 | 3.34 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39 kDa |
| 12 | BUB1B | 1.20e-05 | 2.77 | BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast) |
| 13 | GRK5 | 1.34e-05 | 21.03 | G protein-coupled receptor kinase 5 |
| 14 | TPI1 | 1.34e-05 | 10.82 | triosephosphate isomerase 1 |
| 15 | CYC1 * | 1.34e-05 | 10.36 | cytochrome c-1 |
| 16 | GPC5 | 1.55e-05 | 19.28 | glypican 5 |
| 17 | BYSL | 1.67e-05 | 41.59 | bystin-like |
| 18 | COX5B | 1.67e-05 | 12.52 | cytochrome c oxidase subunit Vb |
| 19 | KATNB1 | 1.84e-05 | 18.37 | katanin p80 (WD repeat containing) subunit B 1 |
| 20 | PRKAB2 | 2.03e-05 | 14.24 | protein kinase, AMP-activated, beta 2 non-catalytic subunit |
| 21 | PSMB3 | 2.03e-05 | 7.43 | proteasome (prosome, macropain) subunit, beta type, 3 |
| 22 | PET112L | 2.16e-05 | 21.46 | PET112-like (yeast) |
| 23 | PSMD8 | 2.16e-05 | 4.88 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 |
| 24 | CSF1 | 2.25e-05 | 20.35 | colony stimulating factor 1 (macrophage) |
| 25 | SFTPA2 | 2.25e-05 | 17.66 | surfactant, pulmonary-associated protein A2 |
| 26 | PTCD1 | 2.25e-05 | 7.36 | pentatricopeptide repeat domain 1 |
| 27 | AARS | 2.25e-05 | 6.65 | alanyl-tRNA synthetase |
| 28 | GUK1 | 2.58e-05 | 5.61 | guanylate kinase 1 |
| 29 | RPS5 | 2.58e-05 | 4.66 | ribosomal protein S5 |
| 30 | MTL5 | 3.3e-05 | 14.60 | metallothionein-like 5, testis-specific (tesmin) |
| 31 | MIF * | 3.8e-05 | 10.72 | macrophage migration inhibitory factor (glycosylation-inhibiting factor) |
| 32 | POLR2H | 3.94e-05 | 4.68 | polymerase (RNA) II (DNA directed) polypeptide H |
| 33 | IFITM2 | 4.38e-05 | 4.17 | interferon induced transmembrane protein 2 (1–8D) |
| 34 | MUTYH | 4.41e-05 | 19.61 | mutY homolog (E. coli) |
| 35 | ITPKA | 4.41e-05 | 15.19 | inositol 1,4,5-trisphosphate 3-kinase A |
| 36 | FDPS | 5.36e-05 | 3.45 | farnesyl diphosphate synthase |
| 37 | HIST1H2BG | 6.08e-05 | 10.23 | histone 1, H2bg |
| 38 | INPP5D | 6.15e-05 | 17.02 | inositol polyphosphate-5-phosphatase, 145 kDa |
| 39 | IDH3G | 6.47e-05 | 47.05 | isocitrate dehydrogenase 3 (NAD+) gamma |
| 40 | ERF | 6.49e-05 | 15.57 | Ets2 repressor factor |
| 41 | PTPRJ | 6.54e-05 | 13.86 | protein tyrosine phosphatase, receptor type, J |
| 42 | ATP5G1 | 7.90e-05 | 4.82 | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c, isoform 1 |
| 43 | CDC45L | 8.49e-05 | 22.94 | CDC45 cell division cycle 45-like (S. cerevisiae) |
| 44 | ENO1 | 9.67e-05 | 4.75 | enolase 1, (alpha) |
| 45 | IDH3B | 0.0001064 | 3.81 | isocitrate dehydrogenase 3 (NAD+) beta |
| 46 | ST3GAL4 | 0.0001140 | 28.99 | ST3 beta-galactoside alpha-2,3-sialyltransferase 4 |
| 47 | DDR2 | 0.0001152 | 15.87 | discoidin domain receptor family, member 2 |
| 48 | IFI30 | 0.0001188 | 3.88 | interferon, gamma-inducible protein 30 |
| 49 | EIF4G1 | 0.0001282 | 3.31 | eukaryotic translation initiation factor 4 gamma, 1 |
| 50 | CXorf27 | 0.0001372 | 11.62 | chromosome X open reading frame 27 |
| 51 | EPB41 | 0.0001423 | 4.05 | erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) |
| 52 | RPS15 | 0.0001427 | 6.91 | ribosomal protein S15 |
| 53 | ABCA3 | 0.0001432 | 30.18 | ATP-binding cassette, sub-family A (ABC1), member 3 |
| 54 | CGA | 0.0001508 | 12.31 | glycoprotein hormones, alpha polypeptide |
| 55 | SLC37A4 | 0.0001527 | 23.08 | solute carrier family 37 (glycerol-6-phosphate transporter), member 4 |
| 56 | NDUFB8 | 0.0001527 | 3.56 | NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19 kDa |
| 57 | CSPG4 | 0.0001583 | 60.14 | chondroitin sulfate proteoglycan 4 (melanoma-associated) |
| 58 | MTHFD1 | 0.0001583 | 21.57 | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, |
| 59 | CYP3A5 | 0.0001586 | 17.90 | cytochrome P450, family 3, subfamily A, polypeptide 5 |
| 60 | FKBP4 | 0.0001611 | 6.51 | FK506 binding protein 4, 59 kDa |
| 61 | SCO2 | 0.0001760 | 14.31 | SCO cytochrome oxidase deficient homolog 2 (yeast) |
| 62 | DPM2 | 0.0001846 | 12.99 | dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit |
| 63 | NRGN | 0.0001945 | 16.26 | neurogranin (protein kinase C substrate, RC3) |
| 64 | TUBA2 | 0.0001988 | 8.87 | tubulin, alpha 2 |
| 65 | GAPD | 0.0001990 | 4.99 | glyceraldehyde-3-phosphate dehydrogenase |
| 66 | CDK4 | 0.0002205 | 6.73 | cyclin-dependent kinase 4 |
| 67 | BIRC5 | 0.0002380 | 6.62 | baculoviral IAP repeat-containing 5 (survivin) |
| 68 | LAMB3 * | 0.0002380 | 5.33 | laminin, beta 3 |
| 69 | SSR4 | 0.0002380 | 3.81 | signal sequence receptor, delta (translocon-associated protein delta) |
| 70 | PIK4CA | 0.0002398 | 12.01 | phosphatidylinositol 4-kinase, catalytic, alpha polypeptide |
* Genes appeared in table 4