Table 1.
Collagen sequence ascession numbers and organisms used for T. erythraeum collagen phylogeny tree construction
| Entrez-ID | Species | Type | Chain | Seq. length |
|---|---|---|---|---|
| AAC35289 | Alvinella pompejana (hydrothermal worm) | Collagen | 890 | |
| 42783914 | Bacillus cereus ATCC 10987 | Collagen | 1321 | |
| 38649122 | Danio rerio (zebrafish) | Type I | α1 | 1447 |
| 34784485 | Danio rerio (zebrafish) | Type I | α3 | 1449 |
| 157030 | Drosophila melanogaster (fruit fly) | Type IV | α1 | 1775 |
| 1920343A | Ephydatia muelleri (Mueller’s freshwater sponge) | Collagen | 1095 | |
| 5921192 | Gallus gallus (chicken) | Type I | α2 | 1362 |
| 15546070 | Gallus gallus (chicken) | Type II | α1 | 1420 |
| 124056487 | Homo sapiens (human) | Type I | α1 | 1464 |
| 450394 | Homo sapiens (human) | Type II | α1 | 1487 |
| 124056490 | Homo sapiens (human) | Type III | α1 | 1466 |
| 83301500 | Mus musculus (house mouse) | Type I | α1 | 1453 |
| 200215 | Mus musculus (house mouse) | Type II | α1 | 1459 |
| AAB96638 | Mytilus edulis (common mussel) | Collagen | 922 | |
| 14164347 | Oncorhynchus mykiss (rainbow trout) | Type I | α1 | 1449 |
| 14164351 | Oncorhynchus mykiss (rainbow trout) | Type I | α2 | 1356 |
| 14164349 | Oncorhynchus mykiss (rainbow trout) | Type I | α3 | 1458 |
| 56565281 | Paralichthys olivaceus (bastard halibut) | Type I | α1 | 1447 |
| 56565283 | Paralichthys olivaceus (bastard halibut) | Type I | α2 | 1352 |
| 82123471 | Rana catesbeiana (bullfrog) | Type I | α1 | 1445 |
| 18202034 | Rana catesbeiana (bullfrog) | Type I | α2 | 1355 |
| AAB24972 | Riftia pachyptila (thermal tubeworm) | Collagen | 1027 | |
| 15021422 | Shrimp white spot syndrome virus | Collagen | 1684 | |
| 37498968 | Streptococcus equi | Collagen | 491 | |
| CAG02093 | Tetraodon nigroviridis (pufferfish) | Collagen | 1399 | |
| 71671489 | Trichodesmium erythraeum IMS101 | Collagen | 1340 |