Table 3.
Haplotype name | Amino acid haplotype* | No. of isolate observed (%) |
TA 1 | RFRFSIKDGKNHSTKIIQRRPQKNT | 2(6.6) |
TA 2 | RFSFSIKDGKNHSTKIIQRRPQKNT | 1(3.3) |
TA3 | RFSFSIKDGKKHSTKIIQRRPQKNT | 1(3.3) |
TA 4 | RFRLSIKDGKNHSTKIIQRRPQKNT | 1(3.3) |
TA 5 | RFRFSIENGKNRSTNIIQRRPQINT | 2(6.6) |
TA6 | RFRFSIENGKNRSTKIIQRRPQINT | 1(3.3) |
TA 7 | RFSFSIKDGKNHSTNIIQRRPQINT | 1(3.3) |
TA 8 | RFRLSIENGEKHSTKIIQRRPQKNT | 1(3.3) |
TA 9 | RFRLSIENGEQRSTKIIQRRPQKNT | 1(3.3) |
TA 10 | RFRLSIENGEKRSTKMIQRRPQINT | 1(3.3) |
TA 11 | RLSLLSIKNGKNHTRNIIQRWPQINT | 2(6.6) |
TA 12 | SFSLSIKNGKNHTRNIQRWPEINT | 1(3.3) |
TA 13 | RFRLSTKNGEKHSTNIIQRWPQKHT | 1(3.3) |
TA 14 | RFRLSTKNGEKHSTNIIQRWPQKHT | 1(3.3) |
TA 15 | RFSLSIKNGEKRSTNIIQRWPQKNT | 1(3.3) |
TA 16 | RFRLSIKNGEKRSTNIIQRWPQINT | 1(3.3) |
TA 17 | RFRFSIKNDEKRSTNIIQRRAQKNT | 3(10) |
TA 18 | RFRLSIKNDEKRSTNIIQRRPQKNT | 1(3.3) |
TA19 | RFRFSIKNDKKRSTNIIQRRPQKNT | 1(3.3) |
TA 20 | RFRLSIKNDKKRSTKIIKTRPQINT | 1(3.3) |
TA 21 | RFRLSIKNDKKRSTNIIQRWPQINT | 1(3.3) |
TA 22 | RFSFSIKDGKNHSTNILQRRPQKNT | 1(3.3) |
TA23 | RFRLSIKNGEKHSTNILQRWPQKNK | 1(3.3) |
TA 24 | RFRLCIKNGEKHSTNILQRWPEINT | 1(3.3) |
TA 25 | RFRLSIKNGEKHSTNILQRWPQINT | 1(3.3) |
* Amino acid residues included in the haplotypes are as follows: 268, 306, 308, 333, 351, 367, 371, 375, 384, 385, 386, 390, 398, 404, 417, 419, 424, 433, 436, 437, 475, 486, 503, 507, 513.