TABLE 2.
Primers used in this study
Primer | Orientation (5′ → 3′) | Sequence (5′ → 3′) | Purpose |
---|---|---|---|
FKS1-453-URA3Fa | Sense | AAAGAGACCCGTACTTGGTTACATTTGGTCACCAACTTCAGAGTGCACCATACCACAGCT | S. cerevisiae mutant generation |
FKS1-649-URA3Ra | Antisense | GTATTCACCTGTACACCTCATTGCAGTGGTGGACAAAATTGGTATTTCACACCGCATAGG | S. cerevisiae mutant generation |
FKS1-mut647Rb | Antisense | ATTCACCTGTACACCTCATTGCAGTGGTGGACAAAATTCTAATTGNATCTCTCAAAGATA | S. cerevisiae mutant generation |
FKS1-375F | Sense | GGTCGTTTTGTCAAGCGTGA | S. cerevisiae mutant generation |
FKS1-707R | Antisense | GATTTCCCAACAGAGAAAATGG | S. cerevisiae mutant generation |
URA3iR2 | Antisense | TGCCTTTAGCGGCTTAACTG | S. cerevisiae mutant generation |
1HS1F | Sense | AATGGGCTGGTGCTCAACAT | Candida universal FKS1 primers |
1HS1R | Antisense | CCTTCAATTTCAGATGGAACTTGATG | Candida universal FKS1 primers |
1HS2F | Sense | AAGATTGGTGCTGGTATGGG | Candida universal FKS1 primers |
1HS2R | Antisense | TAATGGTGCTTGCCAATGAG | Candida universal FKS1 primers |
CoinsHS1F | Sense | GGTATGGTGATATTGTCTG | C. orthopsilosis hot spot 1 sequencing |
CoinsHS2R | Antisense | GGTATGGTGATATTGTCTG | C. orthopsilosis hot spot 2 sequencing |
CminsHS1F | Sense | CAGAGAACATTTGTTAGCC | C. metapsilosis hot spot 1 sequencing |
CminsHS2R | Antisense | GTATAACGTCTGATCCAGTC | C. metapsilosis hot spot 2 sequencing |
CpFKS1expF | Sense | ATCCAAGATCTTCCGGTGCCTCAA | Expression profiling |
CpFKS1expR | Antisense | ATCAGCTGACCATGCTGGATATGG | Expression profiling |
CpFKS2expF | Sense | AATGGGCAGAGGTTGAGAAGGTAG | Expression profiling |
CpFKS2expR | Antisense | GGGTTCCAAGCAGGATATGGATCA | Expression profiling |
CpFKS3expF | Sense | TCGTAGGTTCGAATCCTGCTGAGA | Expression profiling |
CpFKS3expR | Antisense | ATGGTGAAGGCGCAACGGTGTAAA | Expression profiling |
CaFKS1expF | Sense | TGATACTGGTAATCATAGACCAAAAA | Expression profiling |
CaFKS1expR | Antisense | AACTCTGAATGGATTTGTAGAATAAGG | Expression profiling |
CaFKS2expF | Sense | ACTTGCTAGCAGTCGCCAAT | Expression profiling |
CaFKS2expR | Antisense | ACCACCATGAGCGGTTAGAC | Expression profiling |
CaFKS3expF | Sense | ACCTCAATATTCAGCTTGGTGCCC | Expression profiling |
CaFKS3expR | Antisense | GGACAACTCATTCGACTTGACCGT | Expression profiling |
CgFKS1expF | Sense | CAATTGGCAGAACACCGATCCCAA | Expression profiling |
CgFKS1expR | Antisense | AGTTGGGTTGTCCGTACTCATCGT | Expression profiling |
CgFKS2expF | Sense | TACCAACCAGAAGACCAACAGAATGG | Expression profiling |
CgFKS2expR | Antisense | TCACCACCGCTGATGTTTGGGT | Expression profiling |
CgFKS3expF | Sense | GGGAGAGCACGTAAACGTAACTCAA | Expression profiling |
CgFKS3expR | Antisense | TTTGCTGCTGTAAGGTTAGTGGCG | Expression profiling |
But33 | Sense | ATGATAGAGTTGAAAGTAGTTTGGTCAATA | Expression profiling (C. parapsilosis housekeeping gene) |
But34 | Antisense | ACTACTGCTGAAAGAGAAATTGTTAGAGAC | Expression profiling (C. parapsilosis housekeeping gene) |
CaURA3F | Sense | CAACACTAAGACCTATAGTGAGAGAGC | Expression profiling (C. albicans housekeeping gene) |
CaURA3R | Antisense | TGCACATAAATTGGTTTTCTTCA | Expression profiling (C. albicans housekeeping gene) |
CgURA3F | Sense | CGAGAACACTGTTAAGCCATTG | Expression profiling (C. glabrata housekeeping gene) |
CgURA3R | Antisense | CACCATGAGCGTTGGTGATA | Expression profiling (C. glabrata housekeeping gene) |
Sequences corresponding to URA3 flanking sequences in pRS416 are underlined.
Codon 647, incorporating N into the first position, is underlined.