Table 5. The distribution of promoter usage in the SC types and the negative controls (NCs); the upper right section of the table considers the CpG-rich SPs and the lower left section considers the CpG-poor SPs.
*************** | ASC (70.73±8.63) | ESC (78.72±5.53) | PASC (87.29±9.01) | QASC (56.75±6.93) | NC (59.50±7.16) | *************** |
ASC (4.11±2.89) | *************** | 0.08415 | 0.05993 | 0.04319 | 0.01649 | ASC (70.73±8.63) |
ESC (3.39±0.78) | 0.5229 | *************** | 0.2384 | 0.01210 | 0.001145 | ESC (78.72±5.53) |
pASC (2.35±1.81) | 0.2732 | 0.4329 | *************** | 0.01123 | 0.01596 | pASC (87.29±9.01) |
qASC (7.58±4.03) | 0.2714 | 0.2107 | 0.1402 | *************** | 0.6 | qASC (56.75±6.93) |
NC (16.18±5.88) | 0.0009633 | 0.001057 | 0.0005378 | 0.03875 | *************** | NC (59.50±7.16) |
*************** | ASC (4.11±2.89) | ESC (3.39±0.78) | pASC (2.35±1.81) | qASC (7.58±4.03) | NC (16.18±5.88) | *************** |
P-values calculated using the Welch two sample t-tests. The promoters are characterized using the Baek et al (2007) scheme. The key to the abbreviations: ESC - embryonic SC; ASC - adult SC; qASC - quiescent adult SC; pASC - proliferating adult SC; NC - negative control. The first and the last rows and columns provide the SC type and the mean±the standard deviation are given in parenthesis.