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. 2008 Jul 16;3(7):e2712. doi: 10.1371/journal.pone.0002712

Table 13. Over-represented GO term identifiers in the four promoter categories.

Promoter Type GO ID Description Comments
CpG-rich AP GO:0019219 Regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0006350 Transcription
GO:0032774 RNA biosynthetic process
GO:0006355 Regulation of transcription, DNA-dependent
GO:0016481 Negative regulation of transcription
GO:0046108 Uridine metabolic process
GO:0009119 Ribonucleoside metabolic process
CpG–poor AP GO:0030890 Positive regulation of B cell proliferation In all NSCs
GO:0016244 Non-apoptotic programmed cell death In all NSCs
GO:0043071 Positive regulation of non-apoptotic programmed cell death In all NSCs
GO:0045736 Negative regulation of cyclin-dependent protein kinase activity In all NSCs
GO:0009411 Response to UV
GO:0007050 Cell cycle arrest
CpG-rich SP GO:0000070 Mitotic sister chromatid segregation In all ESCs
GO:0000278 Mitotic cell cycle
GO:0007067 Mitosis
GO:0000279 M-phase
CpG-poor SP GO:0006954 Inflammatory response
GO:0048305 Immunoglobulin secretion
GO:0042773 ATP synthesis coupled electron transport
GO:0006122 Mitochondrial electron transport, ubiquinol to cytochrome c